SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P37804	Tagln	QMEQVAQFLK	Thyroid	—	98.9	MRM	['Meth']
P46412	Gpx3	LFWEPMK	Heart	—	98.8	MRM	['Meth']
P50544	Acadvl	SFAVGMFK	AdrenalGland	—	98.9	MRM	['Meth']
P50544	Acadvl	SFAVGMFK	Gallbladder	—	98.7	MRM	['Meth']
P50544	Acadvl	SFAVGMFK	SalivaryGland	—	99.0	MRM	['Meth']
P50544	Acadvl	SFAVGMFK	Thyroid	—	99.0	MRM	['Meth']
P51885	Lum	SVPMVPPGIK	LargeIntestines	—	98.7	MRM	['Meth']
P51885	Lum	SVPMVPPGIK	lung	—	99.1	MRM	['Meth']
P51885	Lum	SVPMVPPGIK	Muscle	—	99.2	MRM	['Meth']
P51885	Lum	SVPMVPPGIK	TailSkin	—	98.5	MRM	['Meth']
P51885	Lum	SVPMVPPGIK	Trachea	—	98.8	MRM	['Meth']
P52480	Pkm	CDENILWLDYK	BoneMarrow	—	98.6	MRM	['Cys']
P52480	Pkm	CDENILWLDYK	Cerebellum	—	98.8	MRM	['Cys']
P52480	Pkm	CDENILWLDYK	Gallbladder	—	98.6	MRM	['Cys']
P52480	Pkm	GIFPVLCK	LargeIntestines	—	98.9	MRM	['Cys']
P53395	Dbt	AASLGLLQFPILNASVDENCQNITYK	Thymus	—	98.5	MRM	['Cys']
P53395	Dbt	LSFMPFFLK	Muscle	—	99.4	MRM	['Meth']
P55264	Adk	TGCTFPEKPDFH	Cerebellum	—	98.7	MRM	['Cys']
P55264	Adk	TGCTFPEKPDFH	Gallbladder	—	98.6	MRM	['Cys']
P58252	Eef2	STLTDSLVCK	lung	—	98.7	MRM	['Cys']
P60764	Rac3	AVLCPPPVK	Trachea	—	98.5	MRM	['Cys']
P63001	Rac1	AVLCPPPVK	AdrenalGland	—	98.8	MRM	['Cys']
P63001	Rac1	AVLCPPPVK	Gallbladder	—	99.1	MRM	['Cys']
P63330	Ppp2ca	ELDQWIEQLNECK	lung	—	99.2	MRM	['Cys']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	AdrenalGland	—	98.6	MRM	['Meth']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	Heart	—	99.1	MRM	['Meth']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	lung	—	98.8	MRM	['Meth']
P70404	Idh3g	HTVTMIPGDGIGPELMLHVK	SmallIntestines	—	99.0	MRM	['Meth']
P97351	Rps3a	LFCVGFTK	lung	—	98.7	MRM	['Cys']
P97351	Rps3a	LFCVGFTK	LymphNodes	—	98.5	MRM	['Cys']
P97351	Rps3a	LFCVGFTK	Pancreas	—	98.7	MRM	['Cys']
P97351	Rps3a	LFCVGFTK	Spleen	—	98.8	MRM	['Cys']
P97447	Fhl1	DCFTCSNCK	LargeIntestines	—	99.2	MRM	['Cys']
P99024	Tubb5	EIVHLQAGQCGNQIGAK	SalivaryGland	—	98.6	MRM	['Cys']
P99024	Tubb5	EIVHLQAGQCGNQIGAK	Thyroid	—	98.7	MRM	['Cys']
Q3TR40	Thbs1	IMADSGPIYDK	plasma	—	99.1	MRM	['Meth']
Q5SWU9	Acaca	FVVMVTPEDLK	lung	—	99.3	MRM	['Meth']
Q60605	Myl6	CDFTEDQTAEFK	SciaticNerve	—	98.9	MRM	['Cys']
Q642K0	Myl6	CDFTEDQTAEFK	AdrenalGland	—	98.5	MRM	['Cys']
Q642K0	Myl6	CDFTEDQTAEFK	BrainStem	—	98.5	MRM	['Cys']
Q642K0	Myl6	CDFTEDQTAEFK	SalivaryGland	—	98.9	MRM	['Cys']
Q642K0	Myl6	CDFTEDQTAEFK	Thymus	—	99.0	MRM	['Cys']
Q64737	Gart	FGDPECQVILPLLK	Heart	—	98.8	MRM	['Cys']
Q64737	Gart	FGDPECQVILPLLK	liver	—	99.1	MRM	['Cys']
Q66JR8	Ptms	IVEMSTSK	Pancreas	—	98.6	MRM	['Meth']
Q7TND9	Dbt	SYLENPAFMLLDLK	lung	—	99.2	MRM	['Meth']
Q7TPR4	Actn1	MLDAEDIVGTARPDEK	Cerebellum	—	99.3	MRM	['Meth']
Q7TPR4	Actn1	MLDAEDIVGTARPDEK	Pancreas	—	98.8	MRM	['Meth']
Q7TPR4	Actn1	MLDAEDIVGTARPDEK	Thymus	—	98.8	MRM	['Meth']
Q80SW1	Ahcyl1	LCVPAMNVNDSVTK	lung	—	99.3	MRM	['Meth', 'Cys']

SysQuan Mouse Database

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