Welcome to SysQuan Mouse
You're looking at the coverage statistics for the SysQuan mouse atlas: how many proteins we can quantify, which tissues they were measured in, and the targeted assays (MRM, PRM) available for each. Mix your mouse samples with our pre-quantified K6-labelled mouse reference proteome to get absolute quantification for your proteins of interest. Explore our database →
Quantifiable Proteins
16766
Targeted Assays
2942
Tissues Covered
19
Protein Coverage by Tissue
| Tissue | Total | Quantifiable |
|---|---|---|
| BoneMarrow single injection | 5478 | 4058 |
| Brain stem | 12163 | 10062 |
| Cerebellum | 11772 | 9629 |
| Cerebrum | 12427 | 10280 |
| Heart | 8666 | 6866 |
| Kidney | 10282 | 8507 |
| Liver | 10501 | 8726 |
| Lung | 12241 | 10315 |
| LymphNodes single injection | 5326 | 3909 |
| Muscle single injection | 3030 | 2218 |
| Pancreas single injection | 3304 | 2637 |
| Plasma | 1951 | 1247 |
| SalivaryGland single injection | 5093 | 3716 |
| SmallIntestines single injection | 5508 | 4150 |
| Spermatozoa single injection | 2885 | 2142 |
| Spleen single injection | 5156 | 3726 |
| Tail skin single injection | 2154 | 1507 |
| Thymus single injection | 4636 | 3239 |
| Thyroid single injection | 3449 | 2486 |
| Total Unique | 20056 | 16766 |
Tissues marked single injection were acquired without offline fractionation. All others were fractionated, which is why their protein counts are higher.
Phosphopeptides by Tissue
| Tissue | Total | Quantifiable |
|---|---|---|
| Brain stem | 4638 | 1872 |
| Cerebellum | 4795 | 1854 |
| Cerebrum | 5801 | 2338 |
| Liver | 2808 | 1159 |
| Total Unique | 10486 | 4133 |
Targeted Assays Available
| Tissue | MRM | PRM-PASEF | Total |
|---|---|---|---|
| BoneMarrow | 1442 | 278 | 1452 |
| Brain stem | 2447 | 480 | 2462 |
| Cerebellum | 2379 | 450 | 2389 |
| Cerebrum | 2406 | 456 | 2422 |
| Heart | 2255 | 441 | 2270 |
| Kidney | 2564 | 503 | 2581 |
| Liver | 2644 | 540 | 2660 |
| Lung | 2584 | 521 | 2599 |
| LymphNodes | 1524 | 286 | 1530 |
| Muscle | 1063 | 201 | 1068 |
| Pancreas | 1219 | 220 | 1226 |
| Plasma | 698 | 194 | 710 |
| SalivaryGland | 1539 | 287 | 1548 |
| SmallIntestines | 1607 | 306 | 1617 |
| Spermatozoa | 696 | 132 | 702 |
| Spleen | 1403 | 269 | 1410 |
| Tail skin | 786 | 166 | 792 |
| Thymus | 1370 | 253 | 1376 |
| Thyroid | 1206 | 228 | 1214 |
Tissue-Specific Peptide Entries
Proteins Shared Across Tissues
Loading plot...