SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P07724	Alb	NECFLQHK	kidney	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	liver	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	lung	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	Muscle	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	plasma	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	SmallIntestines	—	100.0	MRM	['Cys']
P07724	Alb	NECFLQHK	Spermatozoa	—	100.0	MRM	['Cys']
P08121	Col3a1	SGEYWVDPNQGCK	Bladder	—	100.0	MRM	['Cys']
P08121	Col3a1	SGEYWVDPNQGCK	liver	—	100.0	MRM	['Cys']
P08121	Col3a1	SGEYWVDPNQGCK	lung	—	100.0	MRM	['Cys']
P08121	Col3a1	SGEYWVDPNQGCK	plasma	—	100.0	MRM	['Cys']
P08121	Col3a1	SGEYWVDPNQGCK	Trachea	—	100.0	MRM	['Cys']
P08249	Mdh2	FVFSLVDAMNGK	BoneMarrow	—	99.8	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	BrainStem	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Cerebellum	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Cerebrum	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Heart	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	kidney	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	liver	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Muscle	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Spleen	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	TailSkin	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Thyroid	—	100.0	MRM	['Meth']
P08249	Mdh2	FVFSLVDAMNGK	Trachea	—	100.0	MRM	['Meth']
P08249	Mdh2	GYLGPEQLPDCLK	Muscle	—	100.0	MRM	['Cys']
P08249	Mdh2	GYLGPEQLPDCLK	TailSkin	—	100.0	MRM	['Cys']
P08249	Mdh2	GYLGPEQLPDCLK	Thyroid	—	100.0	MRM	['Cys']
P08905	Lyz2	YWCNDGK	lung	—	100.0	MRM	['Cys']
P08905	Lyz2	YWCNDGK	plasma	—	100.0	MRM	['Cys']
P09041	Pgk2	VDFNVPMK	Spermatozoa	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	BoneMarrow	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	Cerebellum	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	Cerebrum	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	Gallbladder	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	LargeIntestines	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	liver	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	lung	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	LymphNodes	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	Muscle	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	plasma	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	SalivaryGland	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	TailSkin	—	100.0	MRM	['Meth']
P09411	Pgk1	VDFNVPMK	Thyroid	—	100.0	MRM	['Meth']
P11276	Fn1	QDGHLWCSTTSNYEQDQK	kidney	—	100.0	MRM	['Cys']
P11276	Fn1	QDGHLWCSTTSNYEQDQK	Thyroid	—	100.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	BrainStem	—	100.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Cerebellum	—	100.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Cerebrum	—	100.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	Muscle	—	100.0	MRM	['Cys']
P13707	Gpd1	FCETTIGCK	SalivaryGland	—	100.0	MRM	['Cys']

SysQuan Mouse Database

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