SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
S4R270	Bin2	FEQSASNFYQQQAEGHK	Cerebellum	—	—	0	MRM	—
S4R2F3	Ank2	IENPNSLQDQSHALLK	SciaticNerve	—	—	0	MRM	—
P01027	C3	GVFVLNKK	BoneMarrow	—	—	1	MRM	—
P01029	C4b	KYVLPNFEVK	Cerebrum	—	—	1	MRM	—
P04247	Mb	ALELFRNDIAAK	Cerebellum	—	—	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	TailSkin	—	—	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	Spleen	—	—	1	MRM	—
Q3UBQ4	Actb	DSYVGDEAQSKR	Spleen	—	—	1	MRM	—
Q60932	Vdac1	LTFDSSFSPNTGKK	TailSkin	—	—	1	MRM	—
Q61703	Itih2	IYGNQDTSSQLKK	AdrenalGland	—	—	1	MRM	—
Q61703	Itih2	KLWAYLTINQLLAER	Heart	—	—	1	MRM	—
Q91X72	Hpx	RLWWLDLK	SalivaryGland	—	—	1	MRM	—
Q91X72	Hpx	RLWWLDLK	SciaticNerve	—	—	1	MRM	—
Q91Z53	Grhpr	RLPEAIEEVK	LargeIntestines	—	—	1	MRM	—
Q9JLZ3	Auh	DRLEGLLAFK	Gallbladder	—	—	1	MRM	—
Q9JLZ3	Auh	DRLEGLLAFK	SciaticNerve	—	—	1	MRM	—
A0A087WR50	Fn1	QDGHLWCSTTSNYEQDQK	Bladder	—	100.0	0	MRM	['Cys']
A0A087WR50	Fn1	QDGHLWCSTTSNYEQDQK	liver	—	100.0	0	MRM	['Cys']
A0A087WR50	Fn1	QDGHLWCSTTSNYEQDQK	lung	—	100.0	0	MRM	['Cys']
A0A087WR50	Fn1	QDGHLWCSTTSNYEQDQK	plasma	—	100.0	0	MRM	['Cys']
A0A087WSN6	Fn1	QDGHLWCSTTSNYEQDQK	AdrenalGland	—	100.0	0	MRM	['Cys']
A0A087WSN6	Fn1	QDGHLWCSTTSNYEQDQK	Gallbladder	—	100.0	0	MRM	['Cys']
A0A087WSN6	Fn1	QDGHLWCSTTSNYEQDQK	Heart	—	100.0	0	MRM	['Cys']
A0A087WSN6	Fn1	QDGHLWCSTTSNYEQDQK	liver	—	100.0	0	MRM	['Cys']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	BrainStem	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Cerebellum	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Cerebrum	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	liver	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	lung	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Spleen	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	TailSkin	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Thyroid	—	100.0	0	MRM	['Meth']
A0A0G2JEU1	Aldh2	LGPALATGNVVVMK	Trachea	—	100.0	0	MRM	['Meth']
A0A0J9YU79	Khk	FGCQVAGK	liver	—	100.0	0	MRM	['Cys']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	BrainStem	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Gallbladder	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Heart	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	kidney	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	liver	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	lung	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	SalivaryGland	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Thymus	—	100.0	0	MRM	['Meth']
A0A0R4J083	Acadl	VQPIYGGTNEIMK	Thyroid	—	100.0	0	MRM	['Meth']
A0A0R4J0Q4	Loxl1	ASFCLEDSTCDFGNLK	lung	—	100.0	0	MRM	['Cys']
A0A0R4J0Q4	Loxl1	ASFCLEDSTCDFGNLK	plasma	—	100.0	0	MRM	['Cys']
A0A1Z4EAV4	B4galnt1	VGSCSDVVVDHASK	liver	—	100.0	0	MRM	['Cys']
A0A571BG59	Tnxb	GFEFSVPFTEMK	plasma	—	100.0	0	MRM	['Meth']
A0A571BG59	Tnxb	GFEFSVPFTEMK	TailSkin	—	100.0	0	MRM	['Meth']
A0A5F8MPH8	Tnxb	GFEFSVPFTEMK	Heart	—	100.0	0	MRM	['Meth']
A0A5F8MPH8	Tnxb	GFEFSVPFTEMK	liver	—	100.0	0	MRM	['Meth']

SysQuan Mouse Database

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