SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
E9Q4Z2	Acacb	TVEVAVPADPANLDSEAK	AdrenalGland	—	83.3	0	MRM	—
E9Q509	Pklr	VQFGIESGK	SmallIntestines	—	83.3	0	MRM	—
O09110	Map2k3	DVKPSNVLINK	BoneMarrow	—	83.2	0	MRM	—
O88342	Wdr1	YEYQPFAGK	BrainStem	—	82.8	0	MRM	—
P14131	Rps16	ALVAYYQK	AdrenalGland	—	82.6	0	MRM	—
P27048	Snrpb	IFIGTFK	Spleen	—	82.5	0	MRM	—
P52479	Usp10	EGLVPVSEDPVAIK	SmallIntestines	—	83.3	0	MRM	—
P61082	Ube2m	DINELNLPK	BrainStem	—	82.6	0	MRM	—
P62196	Psmc5	GVILYGPPGTGK	Cerebellum	—	82.7	0	MRM	—
P62748	Hpcal1	IYANFFPYGDASK	Bladder	—	83.4	0	MRM	—
P62814	Atp6v1b2	AVVGEEALTSDDLLYLEFLQK	Thyroid	—	82.7	0	MRM	—
P97823	Lypla1	ALIDQEVK	AdrenalGland	—	83.3	0	MRM	—
Q3TEA8	Hp1bp3	YVSQYYPK	Pancreas	—	82.6	0	MRM	—
Q3TSA8	Scamp1	EHALAQAELLK	Spermatozoa	—	82.8	0	MRM	—
Q3TZZ7	Esyt2	IHFIEAQDLQGK	Heart	—	83.1	0	MRM	—
Q3U8W9	Hnrnpr	ENILEEFSK	BoneMarrow	—	82.7	0	MRM	—
Q3UGC7	Eif3j1	VLTPEEQLADK	BoneMarrow	—	83.3	0	MRM	—
Q3UIF3	Hsp90aa1	ELISNSSDALDK	liver	—	83.2	0	MRM	—
Q60949	Tbc1d1	FLAEQFHLK	Muscle	—	83.5	0	MRM	—
Q61753	Phgdh	ILQDGGLQVVEK	liver	—	82.9	0	MRM	—
Q62446	Fkbp3	LEIEPEWAYGK	Thymus	—	83.1	0	MRM	—
Q63844	Mapk3	NYLQSLPSK	BrainStem	—	83.3	0	MRM	—
Q63918	Cavin2	GIQNDLTK	Bladder	—	83.5	0	MRM	—
Q64727	Vcl	ETVQTTEDQILK	BoneMarrow	—	83.0	0	MRM	—
Q6IRU5	Cltb	LQELDAASK	SalivaryGland	—	82.9	0	MRM	—
Q6ZQ58	Larp1	FQQVPTDALANK	kidney	—	83.2	0	MRM	—
Q8BGT7	Smndc1	DLQEVIELTK	LymphNodes	—	83.0	0	MRM	—
Q8BMF4	Dlat	DIDSFVPSK	Spleen	—	82.8	0	MRM	—
Q8BUV3	Gphn	DLVQDPSLLGGTISAYK	SalivaryGland	—	83.2	0	MRM	—
Q8CGZ0	Cherp	LLQLWEK	lung	—	82.7	0	MRM	—
Q8CHT0	Aldh4a1	NAAGNFYINDK	Gallbladder	—	83.4	0	MRM	—
Q91WJ8	Fubp1	IGGDAGTSLNSNDYGYGGQK	Thyroid	—	82.9	0	MRM	—
Q99LC3	Ndufa10	VVEDIEYLK	Pancreas	—	83.1	0	MRM	—
Q9CQD1	Rab5a	QASPNIVIALSGNK	Pancreas	—	83.2	0	MRM	—
Q9D0F9	Pgm1	FNISNGGPAPEAITDK	Pancreas	—	82.7	0	MRM	—
Q9D338	Mrpl19	VTTADPYASGK	Muscle	—	82.6	0	MRM	—
Q9D6Z1	Nop56	YPASTVQILGAEK	LargeIntestines	—	83.3	0	MRM	—
Q9DBF1	Aldh7a1	VNLLSFTGSTQVGK	Trachea	—	82.7	0	MRM	—
Q9JIS8	Slc12a4	LVSYTNLTQGAK	Cerebrum	—	83.3	0	MRM	—
Q9QYJ0	Dnaja2	ILEVHVDK	SciaticNerve	—	82.7	0	MRM	—
Q9Z130	Hnrnpdl	VFVGGLSPDTSEEQIK	LymphNodes	—	83.2	0	MRM	—
E9PV24	Fga	RLEVDIDIK	Cerebrum	—	82.7	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	SalivaryGland	—	83.3	1	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	SciaticNerve	—	83.3	1	MRM	—
A0A991EQV1	Rptor	ALETIGANLQK	kidney	—	81.9	0	MRM	—
E9Q616	Ahnak	VDIDVPDVNIEGPDAK	Spermatozoa	—	81.6	0	MRM	—
E9QA16	Cald1	INEWLTK	Gallbladder	—	82.1	0	MRM	—
F8VQC1	Srp72	VLANNSLSFEK	Pancreas	—	82.5	0	MRM	—
G3UXW9	Gps1	NVISSSSFK	Cerebrum	—	81.8	0	MRM	—
O08738	Casp6	FSDLGFEVK	Cerebrum	—	82.2	0	MRM	—

SysQuan Mouse Database

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