SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A0A087WR50	Fn1	VGDTYERPK	liver	—	100.0	MRM+PRM	—
A0A087WR50	Fn1	YEKPGSPPR	liver	—	100.0	MRM+PRM	—
A0A087WRG0	Pfkfb2	HGESEFNLLGK	BrainStem	—	100.0	MRM+PRM	—
A0A087WRG0	Pfkfb2	HGESEFNLLGK	Cerebellum	—	100.0	MRM+PRM	—
A0A087WRG0	Pfkfb2	HGESEFNLLGK	MockWholeBrain	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	BrainStem	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	Cerebellum	—	100.0	MRM+PRM	—
A0A087WS16	Col6a3	LLVLITGGK	Cerebrum	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	ITYGETGGNSPVQEFTVPGSK	BrainStem	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	ITYGETGGNSPVQEFTVPGSK	liver	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	SYTITGLQPGTDYK	Cerebellum	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	VGDTYERPK	kidney	—	100.0	MRM+PRM	—
A0A087WSN6	Fn1	YEKPGSPPR	kidney	—	100.0	MRM+PRM	—
A0A0J9YUQ8	Gsn	QTQVSVLPEGGETPLFK	BrainStem	—	100.0	MRM+PRM	—
A0A0J9YUQ8	Gsn	QTQVSVLPEGGETPLFK	Cerebellum	—	100.0	MRM+PRM	—
A0A0N4SVB8	Arl8b	DLPNALDEK	kidney	—	100.0	MRM+PRM	—
A0A0R4J005	Lims1	VIEGDVVSALNK	Spleen	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	BrainStem	—	100.0	MRM+PRM	—
A0A0R4J049	Prmt5	YSQYQQAIYK	Cerebrum	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	BrainStem	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	Cerebellum	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	Cerebrum	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	kidney	—	100.0	MRM+PRM	—
A0A1B0GRV0	Bpnt1	EEDLVVWVDPLDGTK	liver	—	100.0	MRM+PRM	—
A0A1L1SV25	Actn4	LSGSNPYTTVTPQIINSK	BrainStem	—	100.0	MRM+PRM	—
A0A1L1SV25	Actn4	LSGSNPYTTVTPQIINSK	Cerebrum	—	100.0	MRM+PRM	—
A0A2I3BPT1	App	YLETPGDENEHAHFQK	BrainStem	—	100.0	MRM+PRM	—
A0A338P6S3	Smpd4	LAQLITQAK	kidney	—	100.0	MRM+PRM	—
A0A338P6S3	Smpd4	LAQLITQAK	liver	—	100.0	MRM+PRM	—
A0A411ACY8	Cacna2d1	EDFASNEVVYYNAK	BrainStem	—	100.0	MRM+PRM	—
A0A411ACY8	Cacna2d1	EDFASNEVVYYNAK	Cerebrum	—	100.0	MRM+PRM	—
A0A411ACY8	Cacna2d1	EDFASNEVVYYNAK	MockWholeBrain	—	100.0	MRM+PRM	—
A0A7P0A156	Nadk2	VTNEYNESLLYSPEEPK	Cerebellum	—	100.0	MRM+PRM	—
A0A991ELE1	Ptprg	DNSALDPIIHGLK	BrainStem	—	100.0	MRM+PRM	—
A0A991ELE1	Ptprg	DNSALDPIIHGLK	Cerebrum	—	100.0	MRM+PRM	—
A0A991ELE1	Ptprg	DNSALDPIIHGLK	kidney	—	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	Cerebellum	—	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	Cerebrum	—	100.0	MRM+PRM	—
A0AA74KSY4	Hdgf	DLFPYEESK	MockWholeBrain	—	100.0	MRM+PRM	—
A0AAQ4VMY7	Dpysl2	GSPLVVISQGK	Cerebellum	—	100.0	MRM+PRM	—
A0AAQ4VMY7	Dpysl2	GSPLVVISQGK	MockWholeBrain	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	BrainStem	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	Cerebellum	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	Cerebrum	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	kidney	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	liver	—	100.0	MRM+PRM	—
A1A4T2	Ganab	DEPGAWEETFK	MockWholeBrain	—	100.0	MRM+PRM	—
A1BN54	Actn1	DYETATLSEIK	kidney	—	100.0	MRM+PRM	—
A2ABY3	Pcyt2	DGSDPYQEPK	liver	—	100.0	MRM+PRM	—
A2AJ15	Man1b1	ADSYYEYLLK	BrainStem	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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