SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9CQZ5	Ndufa6	VVDLLVIK	BoneMarrow	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	BrainStem	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Cerebellum	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Cerebrum	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Heart	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	kidney	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	LargeIntestines	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	liver	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Muscle	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Pancreas	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Thymus	—	100.0	MRM	—
Q9CR02	Tma16	EWDFDLK	BrainStem	—	100.0	MRM	—
Q9CR02	Tma16	EWDFDLK	Cerebellum	—	100.0	MRM	—
Q9CR02	Tma16	EWDFDLK	Cerebrum	—	100.0	MRM	—
Q9CR02	Tma16	EWDFDLK	kidney	—	100.0	MRM	—
Q9CR02	Tma16	EWDFDLK	liver	—	100.0	MRM	—
Q9CR02	Tma16	EWDFDLK	lung	—	100.0	MRM	—
Q9CR08	Pop4	LFDIKPEQQR	Cerebellum	—	100.0	MRM	—
Q9CR08	Pop4	LFDIKPEQQR	Cerebrum	—	100.0	MRM	—
Q9CR08	Pop4	LFDIKPEQQR	kidney	—	100.0	MRM	—
Q9CR08	Pop4	LFDIKPEQQR	liver	—	100.0	MRM	—
Q9CR39	Wdr45b	QSSLASASFLPK	Cerebellum	—	100.0	MRM	—
Q9CR39	Wdr45b	QSSLASASFLPK	Heart	—	100.0	MRM	—
Q9CR39	Wdr45b	QSSLASASFLPK	kidney	—	100.0	MRM	—
Q9CR39	Wdr45b	QSSLASASFLPK	liver	—	100.0	MRM	—
Q9CR39	Wdr45b	QSSLASASFLPK	lung	—	100.0	MRM	—
Q9CR39	Wdr45b	QSSLASASFLPK	Muscle	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	BrainStem	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	Cerebellum	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	Cerebrum	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	Heart	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	kidney	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	liver	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	lung	—	100.0	MRM	—
Q9CR89	Ergic2	LQEEHSLQDVIFK	Muscle	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	BrainStem	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	Cerebellum	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	Cerebrum	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	Heart	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	kidney	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	liver	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	lung	—	100.0	MRM	—
Q9CRD0	Ociad1	GILSSHPK	Muscle	—	100.0	MRM	—
Q9CRD2	Emc2	YFAQALK	BrainStem	—	100.0	MRM	—
Q9CRD2	Emc2	YFAQALK	Cerebellum	—	100.0	MRM	—
Q9CRD2	Emc2	YFAQALK	Cerebrum	—	100.0	MRM	—
Q9CRD2	Emc2	YFAQALK	Heart	—	100.0	MRM	—
Q9CRD2	Emc2	YFAQALK	liver	—	100.0	MRM	—
Q9CRD2	Emc2	YFAQALK	lung	—	100.0	MRM	—
Q9CRD2	Emc2	YFAQALK	Muscle	—	100.0	MRM	—

SysQuan Mouse Database

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