SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q9CQN1	Trap1	ELISNASDALEK	Cerebellum	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	Gallbladder	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	LargeIntestines	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	liver	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	LymphNodes	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	Muscle	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	Pancreas	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	SalivaryGland	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	Spermatozoa	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	Spleen	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	Thymus	—	100.0	MRM	—
Q9CQN1	Trap1	ELISNASDALEK	Thyroid	—	100.0	MRM	—
Q9CQR6	Ppp6c	YLPENDLK	Cerebellum	—	100.0	MRM	—
Q9CQR6	Ppp6c	YLPENDLK	Cerebrum	—	100.0	MRM	—
Q9CQR6	Ppp6c	YLPENDLK	Heart	—	100.0	MRM	—
Q9CQR6	Ppp6c	YLPENDLK	kidney	—	100.0	MRM	—
Q9CQR6	Ppp6c	YLPENDLK	liver	—	100.0	MRM	—
Q9CQR6	Ppp6c	YLPENDLK	lung	—	100.0	MRM	—
Q9CQR6	Ppp6c	YLPENDLK	Muscle	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	AdrenalGland	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Bladder	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	BoneMarrow	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	BrainStem	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Gallbladder	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Heart	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	kidney	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	LargeIntestines	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	liver	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	LymphNodes	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Muscle	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Pancreas	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	SalivaryGland	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	SciaticNerve	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	SmallIntestines	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Thymus	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Thyroid	—	100.0	MRM	—
Q9CQU0	Txndc12	ILFLDPSGK	Trachea	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Cerebellum	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Gallbladder	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Heart	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	kidney	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	lung	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Muscle	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Pancreas	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	SciaticNerve	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	TailSkin	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Thymus	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Thyroid	—	100.0	MRM	—
Q9CQW1	Ykt6	VAFTLLEK	Trachea	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Bladder	—	100.0	MRM	—

SysQuan Mouse Database

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