SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q8K2Q9	Shtn1	DQIVSVQEEK	kidney	—	100.0	MRM	—
Q8K2Q9	Shtn1	DQIVSVQEEK	lung	—	100.0	MRM	—
Q8K2Q9	Shtn1	DQIVSVQEEK	SalivaryGland	—	100.0	MRM	—
Q8K2T8	Paf1	LLEEEIQAPTSSK	Cerebellum	—	100.0	MRM	—
Q8K2T8	Paf1	LLEEEIQAPTSSK	lung	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	BoneMarrow	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	BrainStem	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	Cerebellum	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	Cerebrum	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	Heart	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	kidney	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	liver	—	100.0	MRM	—
Q8K2V6	Ipo11	NFEDSSPETLEAHK	lung	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	BoneMarrow	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	BrainStem	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	Cerebrum	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	Gallbladder	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	Heart	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	kidney	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	liver	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	LymphNodes	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	Muscle	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	SalivaryGland	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	SciaticNerve	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	Spermatozoa	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	Thymus	—	100.0	MRM	—
Q8K310	Matr3	GAPPSSNIEDFHGLLPK	Thyroid	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	BrainStem	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	Cerebellum	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	Heart	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	kidney	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	liver	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	Muscle	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	Pancreas	—	100.0	MRM	—
Q8K3G9	Appl2	QIYLTDNPEAVAIK	SalivaryGland	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	BrainStem	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Cerebellum	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Cerebrum	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Heart	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	LargeIntestines	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	lung	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Spermatozoa	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Thymus	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Trachea	—	100.0	MRM	—
Q8K411	Pitrm1	FTQQDIDEAK	BrainStem	—	100.0	MRM	—
Q8K411	Pitrm1	FTQQDIDEAK	Cerebellum	—	100.0	MRM	—
Q8K411	Pitrm1	FTQQDIDEAK	Cerebrum	—	100.0	MRM	—
Q8K411	Pitrm1	FTQQDIDEAK	Heart	—	100.0	MRM	—
Q8K411	Pitrm1	FTQQDIDEAK	kidney	—	100.0	MRM	—
Q8K411	Pitrm1	FTQQDIDEAK	lung	—	100.0	MRM	—

SysQuan Mouse Database

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