SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q8K1Z0	Coq9	LVQLGQAEK	Gallbladder	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	liver	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	lung	—	100.0	MRM	—
Q8K212	Pacs1	DVSVPVAEIK	Heart	—	100.0	MRM	—
Q8K212	Pacs1	DVSVPVAEIK	liver	—	100.0	MRM	—
Q8K212	Pacs1	DVSVPVAEIK	Muscle	—	100.0	MRM	—
Q8K284	Gtf3c1	IASNVLNTK	Cerebellum	—	100.0	MRM	—
Q8K284	Gtf3c1	IASNVLNTK	Cerebrum	—	100.0	MRM	—
Q8K284	Gtf3c1	IASNVLNTK	liver	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	BoneMarrow	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Cerebellum	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Cerebrum	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Heart	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	LargeIntestines	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	liver	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	lung	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Muscle	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Pancreas	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Spleen	—	100.0	MRM	—
Q8K2C7	Os9	ELENIIQETEK	BrainStem	—	100.0	MRM	—
Q8K2C7	Os9	ELENIIQETEK	Cerebellum	—	100.0	MRM	—
Q8K2C7	Os9	ELENIIQETEK	Cerebrum	—	100.0	MRM	—
Q8K2C7	Os9	ELENIIQETEK	kidney	—	100.0	MRM	—
Q8K2C7	Os9	ELENIIQETEK	lung	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	BoneMarrow	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	BrainStem	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	Cerebellum	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	Cerebrum	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	Heart	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	kidney	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	liver	—	100.0	MRM	—
Q8K2F0	Brd3	AVHEQLAALSQAPVNKPK	lung	—	100.0	MRM	—
Q8K2I1	Fntb	LQDDSVETVTSIEQAK	Cerebellum	—	100.0	MRM	—
Q8K2I1	Fntb	LQDDSVETVTSIEQAK	Heart	—	100.0	MRM	—
Q8K2I1	Fntb	LQDDSVETVTSIEQAK	kidney	—	100.0	MRM	—
Q8K2I1	Fntb	LQDDSVETVTSIEQAK	liver	—	100.0	MRM	—
Q8K2I1	Fntb	LQDDSVETVTSIEQAK	Muscle	—	100.0	MRM	—
Q8K2I1	Fntb	LQDDSVETVTSIEQAK	SmallIntestines	—	100.0	MRM	—
Q8K2L8	Trappc12	LLTAHGQGYGK	BrainStem	—	100.0	MRM	—
Q8K2L8	Trappc12	LLTAHGQGYGK	Cerebellum	—	100.0	MRM	—
Q8K2L8	Trappc12	LLTAHGQGYGK	Cerebrum	—	100.0	MRM	—
Q8K2L8	Trappc12	LLTAHGQGYGK	Heart	—	100.0	MRM	—
Q8K2L8	Trappc12	LLTAHGQGYGK	kidney	—	100.0	MRM	—
Q8K2L8	Trappc12	LLTAHGQGYGK	liver	—	100.0	MRM	—
Q8K2L8	Trappc12	LLTAHGQGYGK	lung	—	100.0	MRM	—
Q8K2Q7	Brox	IPTEAPQLELK	kidney	—	100.0	MRM	—
Q8K2Q7	Brox	IPTEAPQLELK	LargeIntestines	—	100.0	MRM	—
Q8K2Q9	Shtn1	DQIVSVQEEK	BrainStem	—	100.0	MRM	—
Q8K2Q9	Shtn1	DQIVSVQEEK	Cerebellum	—	100.0	MRM	—
Q8K2Q9	Shtn1	DQIVSVQEEK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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