SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q8K1A6	Cc2d1a	FDFPYPNVEEAQK	Cerebellum	—	100.0	MRM	—
Q8K1A6	Cc2d1a	FDFPYPNVEEAQK	kidney	—	100.0	MRM	—
Q8K1A6	Cc2d1a	FDFPYPNVEEAQK	liver	—	100.0	MRM	—
Q8K1A6	Cc2d1a	FDFPYPNVEEAQK	lung	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	BrainStem	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	Cerebrum	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	Heart	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	kidney	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	liver	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	lung	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	Muscle	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	plasma	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	Spleen	—	100.0	MRM	—
Q8K1B8	Fermt3	YYSFFDLDPK	Thymus	—	100.0	MRM	—
Q8K1H1	Tdrd7	SLTGDWIPFK	BrainStem	—	100.0	MRM	—
Q8K1H1	Tdrd7	SLTGDWIPFK	Cerebellum	—	100.0	MRM	—
Q8K1H1	Tdrd7	SLTGDWIPFK	Cerebrum	—	100.0	MRM	—
Q8K1H1	Tdrd7	SLTGDWIPFK	kidney	—	100.0	MRM	—
Q8K1H1	Tdrd7	SLTGDWIPFK	liver	—	100.0	MRM	—
Q8K1H1	Tdrd7	SLTGDWIPFK	lung	—	100.0	MRM	—
Q8K1R3	Pnpt1	GITALQADIK	BrainStem	—	100.0	MRM	—
Q8K1R3	Pnpt1	GITALQADIK	Cerebellum	—	100.0	MRM	—
Q8K1R3	Pnpt1	GITALQADIK	Cerebrum	—	100.0	MRM	—
Q8K1R3	Pnpt1	GITALQADIK	Heart	—	100.0	MRM	—
Q8K1R3	Pnpt1	GITALQADIK	kidney	—	100.0	MRM	—
Q8K1R3	Pnpt1	GITALQADIK	lung	—	100.0	MRM	—
Q8K1R7	Nek9	VTLLNAPTK	BrainStem	—	100.0	MRM	—
Q8K1R7	Nek9	VTLLNAPTK	Cerebrum	—	100.0	MRM	—
Q8K1R7	Nek9	VTLLNAPTK	Heart	—	100.0	MRM	—
Q8K1R7	Nek9	VTLLNAPTK	kidney	—	100.0	MRM	—
Q8K1R7	Nek9	VTLLNAPTK	lung	—	100.0	MRM	—
Q8K1R7	Nek9	VTLLNAPTK	Muscle	—	100.0	MRM	—
Q8K1X4	Nckap1l	EFVTPDTDIK	Cerebrum	—	100.0	MRM	—
Q8K1X4	Nckap1l	EFVTPDTDIK	lung	—	100.0	MRM	—
Q8K1X5	Ehd1	LDISDEFSEVIK	Muscle	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	Bladder	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	BrainStem	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	Cerebellum	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	Gallbladder	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	liver	—	100.0	MRM	—
Q8K1Z0	Coq9	LVQLGQAEK	lung	—	100.0	MRM	—
Q8K212	Pacs1	DVSVPVAEIK	Heart	—	100.0	MRM	—
Q8K212	Pacs1	DVSVPVAEIK	liver	—	100.0	MRM	—
Q8K212	Pacs1	DVSVPVAEIK	Muscle	—	100.0	MRM	—
Q8K284	Gtf3c1	IASNVLNTK	Cerebellum	—	100.0	MRM	—
Q8K284	Gtf3c1	IASNVLNTK	Cerebrum	—	100.0	MRM	—
Q8K284	Gtf3c1	IASNVLNTK	liver	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	BoneMarrow	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	BrainStem	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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