| Uniprot ID | Gene | Peptide Sequence | Tissue | Mouse Conc. (fmol/μg) | Incorp. (%) | Missed Cleav. | Assays Available | PTM | |
|---|---|---|---|---|---|---|---|---|---|
| E9Q3X0 | Mvp | IEGEGSVLQAK | Cerebrum | — | 93.8 | 0 | MRM | — | |
| P19536 | Cox5b | EDPNLVPSISNK | Cerebrum | — | 93.7 | 0 | MRM | — | |
| P05064 | Aldoa | ADDGRPFPQVIK | Cerebellum | — | 93.7 | 0 | MRM | — | |
| A2CG49 | Kalrn | LQGFEGTLTAQGK | Cerebrum | — | 93.7 | 0 | MRM | — | |
| P10126 | Eef1a1 | LPLQDVYK | Cerebellum | — | 93.7 | 0 | MRM | — | |
| P50544 | Acadvl | FFEEVNDPAK | BrainStem | — | 93.7 | 0 | MRM | — | |
| O35129 | Phb2 | IVQAEGEAEAAK | Cerebellum | — | 93.6 | 0 | MRM | — | |
| Q6PAR5 | Gapvd1 | ILEDTQFVDGYK | MockWholeBrain | — | 93.6 | 0 | MRM | — | |
| P21550 | Eno3 | GNPTVEVDLHTAK | MockWholeBrain | — | 93.6 | 0 | MRM | — | |
| P07356 | Anxa2 | TPAQYDASELK | BrainStem | — | 93.6 | 0 | MRM | — | |
| Q9D2R0 | Aacs | WLSVLEEK | Cerebrum | — | 93.6 | 0 | MRM | — | |
| Q9D1Q6 | Erp44 | NIIGYFEQK | Cerebrum | — | 93.5 | 0 | MRM | — | |
| P97798 | Neo1 | ITWADNSLPK | Cerebrum | — | 93.5 | 0 | MRM | — | |
| Q8BJ64 | Chdh | VLLLEAGPK | BrainStem | — | 93.5 | 0 | MRM | — | |
| P05201 | Got1 | NLDYVATSIHEAVTK | Cerebellum | — | 93.5 | 0 | MRM | — | |
| F8VPN4 | Agl | SGSLAVDNADPILK | Cerebellum | — | 93.5 | 0 | MRM | — | |
| Q921M7 | Cyrib | EAIQHPADEK | MockWholeBrain | — | 93.5 | 0 | MRM | — | |
| Q7TMY8 | Huwe1 | FLQFVTGTSK | Cerebellum | — | 93.5 | 0 | MRM | — | |
| Q9ES46 | Parvb | LNVAEVTQSEIGQK | BrainStem | — | 93.4 | 0 | MRM | — | |
| Q9D892 | Itpa | IDLPEYQGEPDEISIQK | BrainStem | — | 93.4 | 0 | MRM | — | |
| P35700 | Prdx1 | LVQAFQFTDK | BrainStem | — | 93.4 | 0 | MRM | — | |
| Q9DBJ1 | Pgam1 | ALPFWNEEIVPQIK | Cerebellum | — | 93.4 | 0 | MRM | — | |
| Q9CPV4 | Glod4 | VTLAVSDLQK | Cerebellum | — | 93.4 | 0 | MRM | — | |
| P32020 | Scp2 | GSVLPNSDK | Cerebellum | — | 93.4 | 0 | MRM | — | |
| Q8BH95 | Echs1 | AFAAGADIK | Cerebrum | — | 93.4 | 0 | MRM | — | |
| P48678 | Lmna | VAVEEVDEEGK | Cerebellum | — | 93.4 | 0 | MRM | — | |
| Q8VEM8 | Slc25a3 | TVEALYK | Cerebellum | — | 93.4 | 0 | MRM | — | |
| P62874 | Gnb1 | LLVSASQDGK | BrainStem | — | 93.3 | 0 | MRM | — | |
| P62880 | Gnb2 | LLVSASQDGK | BrainStem | — | 93.3 | 0 | MRM | — | |
| P62259 | Ywhae | HLIPAANTGESK | BrainStem | — | 93.3 | 0 | MRM | — | |
| Q9QZQ1 | Afdn | LQLSVTEVGTEK | Cerebrum | — | 93.2 | 0 | MRM | — | |
| Q8BPF4 | — | VDPVNFK | Cerebellum | — | 93.2 | 0 | MRM | — | |
| Q8BGG7 | Ubash3b | FAADFAAEAASK | Cerebellum | — | 93.2 | 0 | MRM | — | |
| A0A0R4J2B2 | Kctd12 | FNFLEQAFDK | MockWholeBrain | — | 93.2 | 0 | MRM | — | |
| Q9DAK9 | Phpt1 | WAEYHADIYDK | Cerebrum | — | 93.2 | 0 | MRM | — | |
| P12970 | Rpl7a | NFGIGQDIQPK | Cerebellum | — | 93.2 | 0 | MRM | — | |
| P70296 | Pebp1 | LYEQLSGK | Cerebellum | — | 93.2 | 0 | MRM | — | |
| P28028 | Braf | SNNIFLHEDLTVK | MockWholeBrain | — | 93.2 | 0 | MRM | — | |
| P56480 | Atp5f1b | VVDLLAPYAK | Cerebellum | — | 93.1 | 0 | MRM | — | |
| Q8R059 | Gale | DYIHVVDLAK | MockWholeBrain | — | 93.1 | 0 | MRM | — | |
| Q9QYG0 | Ndrg2 | LDPTQTSFLK | BrainStem | — | 93.1 | 0 | MRM | — | |
| Q9CZY3 | Ube2v1 | LLEELEEGQK | Cerebrum | — | 93.1 | 0 | MRM | — | |
| Q9D2M8 | Ube2v2 | LLEELEEGQK | Cerebrum | — | 93.1 | 0 | MRM | — | |
| P16125 | Ldhb | SADTLWDIQK | Cerebellum | — | 93.1 | 0 | MRM | — | |
| Q9DCD0 | Pgd | VDDFLANEAK | MockWholeBrain | — | 93.0 | 0 | MRM | — | |
| Q9CQ62 | Decr1 | VAFITGGGTGLGK | MockWholeBrain | — | 93.0 | 0 | MRM | — | |
| Q62425 | Ndufa4 | NNPEPWNK | Cerebellum | — | 93.0 | 0 | MRM | — | |
| A0A338P6E5 | Dlg4 | ANDDLLSEFPDK | BrainStem | — | 92.9 | 0 | MRM | — | |
| Q8CGB9 | Ide | VLLISDPTTDK | Cerebrum | — | 92.9 | 0 | MRM | — | |
| Q03265 | Atp5f1a | VVDALGNAIDGK | Cerebellum | — | 92.9 | 0 | MRM | — |