SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q00612	G6pdx	VQPNEAVYTK	Thyroid	—	100.0	MRM+PRM	—
Q01149	Col1a2	DYEVDATLK	lung	—	100.0	MRM+PRM	—
Q01149	Col1a2	DYEVDATLK	plasma	—	100.0	MRM+PRM	—
Q01339	Apoh	EHSSLAFWK	Heart	—	100.0	MRM+PRM	—
Q01339	Apoh	EHSSLAFWK	plasma	—	100.0	MRM+PRM	—
Q01339	Apoh	EHSSLAFWK	Spermatozoa	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	BoneMarrow	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	BrainStem	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	Cerebellum	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	Cerebrum	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	LymphNodes	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	SalivaryGland	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	SmallIntestines	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	Spleen	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	Thymus	—	100.0	MRM+PRM	—
Q01730	Rsu1	DNDLISLPK	Thyroid	—	100.0	MRM+PRM	—
Q02819	Nucb1	VNVPGSQAQLK	BoneMarrow	—	100.0	MRM+PRM	—
Q02819	Nucb1	VNVPGSQAQLK	LymphNodes	—	100.0	MRM+PRM	—
Q02819	Nucb1	VNVPGSQAQLK	Pancreas	—	100.0	MRM+PRM	—
Q02819	Nucb1	VNVPGSQAQLK	plasma	—	100.0	MRM+PRM	—
Q03311	Bche	DEGTAFLVYGAPGFSK	liver	—	100.0	MRM+PRM	—
Q03311	Bche	NIAAFGGNPK	plasma	—	100.0	MRM+PRM	—
Q05909	Ptprg	DNSALDPIIHGLK	BrainStem	—	100.0	MRM+PRM	—
Q05909	Ptprg	DNSALDPIIHGLK	Cerebellum	—	100.0	MRM+PRM	—
Q05909	Ptprg	DNSALDPIIHGLK	Heart	—	100.0	MRM+PRM	—
Q05909	Ptprg	DNSALDPIIHGLK	lung	—	100.0	MRM+PRM	—
Q05909	Ptprg	DNSALDPIIHGLK	plasma	—	100.0	MRM+PRM	—
Q05915	Gch1	VHIGYLPNK	lung	—	100.0	MRM+PRM	—
Q07968	F13b	LIENGYFHPVK	plasma	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	BrainStem	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	Cerebrum	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	Heart	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	kidney	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	liver	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	lung	—	100.0	MRM+PRM	—
Q08879	Fbln1	DSFDIIK	plasma	—	100.0	MRM+PRM	—
Q09XV5	Chd8	ELPSGQYTEAEEFFVK	BrainStem	—	100.0	MRM+PRM	—
Q09XV5	Chd8	ELPSGQYTEAEEFFVK	Cerebellum	—	100.0	MRM+PRM	—
Q09XV5	Chd8	ELPSGQYTEAEEFFVK	Cerebrum	—	100.0	MRM+PRM	—
Q09XV5	Chd8	ELPSGQYTEAEEFFVK	liver	—	100.0	MRM+PRM	—
Q09XV5	Chd8	ELPSGQYTEAEEFFVK	lung	—	100.0	MRM+PRM	—
Q0VG47	Hnrnpa3	EDSVKPGAHLTVK	Muscle	—	100.0	MRM+PRM	—
Q0VG47	Hnrnpa3	EDSVKPGAHLTVK	SalivaryGland	—	100.0	MRM+PRM	—
Q0VG47	Hnrnpa3	EDSVKPGAHLTVK	SmallIntestines	—	100.0	MRM+PRM	—
Q0VG47	Hnrnpa3	EDSVKPGAHLTVK	Spermatozoa	—	100.0	MRM+PRM	—
Q0VG47	Hnrnpa3	EDSVKPGAHLTVK	TailSkin	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	BrainStem	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	Cerebellum	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	Cerebrum	—	100.0	MRM+PRM	—
Q11011	Npepps	IDFVGELNDK	lung	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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