| Uniprot ID | Gene | Peptide Sequence | Tissue | Mouse Conc. (fmol/μg) | Incorp. (%) | Missed Cleav. | Assays Available | PTM | |
|---|---|---|---|---|---|---|---|---|---|
| Q9Z1G4 | Atp6v0a1 | NFLELTELK | Cerebellum | — | 95.1 | 0 | MRM | — | |
| A0A087WNU5 | Ank3 | IIEVHIEK | Cerebrum | — | 95.1 | 0 | MRM | — | |
| Q6P069 | Sri | SGTVDPQELQK | BrainStem | — | 95.1 | 0 | MRM | — | |
| P50247 | Ahcy | VPAINVNDSVTK | BrainStem | — | 95.1 | 0 | MRM | — | |
| Q8K4K6 | Pank1 | DITAEEEQEEVENLK | MockWholeBrain | — | 95.0 | 0 | MRM | — | |
| P62827 | Ran | AAQGEPQVQFK | BrainStem | — | 95.0 | 0 | MRM | — | |
| Q62425 | Ndufa4 | FYSVNVDYSK | BrainStem | — | 95.0 | 0 | MRM | — | |
| Q60668 | Hnrnpd | IFVGGLSPDTPEEK | Cerebellum | — | 95.0 | 0 | MRM | — | |
| Q9WUM5 | Suclg1 | LVGGTTPGK | BrainStem | — | 95.0 | 0 | MRM | — | |
| P05214 | Tuba3a | VGINYQPPTVVPGGDLAK | BrainStem | — | 95.0 | 0 | MRM | — | |
| P63038 | Hspd1 | VGEVIVTK | BrainStem | — | 95.0 | 0 | MRM | — | |
| Q91V41 | Rab14 | TGENVEDAFLEAAK | BrainStem | — | 95.0 | 0 | MRM | — | |
| Q6P069 | Sri | SGTVDPQELQK | Cerebrum | — | 94.9 | 0 | MRM | — | |
| P10126 | Eef1a1 | LPLQDVYK | BrainStem | — | 94.9 | 0 | MRM | — | |
| P62631 | Eef1a2 | LPLQDVYK | BrainStem | — | 94.9 | 0 | MRM | — | |
| O55042 | Snca | EQVTNVGGAVVTGVTAVAQK | BrainStem | — | 94.9 | 0 | MRM | — | |
| P05202 | Got2 | TQLVSNLK | BrainStem | — | 94.9 | 0 | MRM | — | |
| Q9Z204 | Hnrnpc | SDVEAIFSK | MockWholeBrain | — | 94.9 | 0 | MRM | — | |
| Q9WVK4 | Ehd1 | ELVNNLGEIYQK | Cerebrum | — | 94.9 | 0 | MRM | — | |
| Q8BT60 | Cpne3 | SDPYLEFHK | BrainStem | — | 94.9 | 0 | MRM | — | |
| O35129 | Phb2 | IVQAEGEAEAAK | BrainStem | — | 94.9 | 0 | MRM | — | |
| Q61696 | Hspa1a | NQVALNPQNTVFDAK | Cerebellum | — | 94.9 | 0 | MRM | — | |
| P62960 | Ybx1 | EDVFVHQTAIK | Cerebrum | — | 94.9 | 0 | MRM | — | |
| Q99JB2 | Stoml2 | AEQINQAAGEASAVLAK | MockWholeBrain | — | 94.8 | 0 | MRM | — | |
| Q03265 | Atp5f1a | STVAQLVK | BrainStem | — | 94.8 | 0 | MRM | — | |
| O70152 | Dpm1 | LGGNEIVSFLK | Cerebrum | — | 94.8 | 0 | MRM | — | |
| Q9D358 | Acp1 | IELLGSYDPQK | Cerebellum | — | 94.8 | 0 | MRM | — | |
| O55106 | Strn | SELTDSASVLDNFK | MockWholeBrain | — | 94.8 | 0 | MRM | — | |
| P37804 | Tagln | AAEDYGVIK | MockWholeBrain | — | 94.8 | 0 | MRM | — | |
| P52503 | Ndufs6 | VYINLDK | Cerebrum | — | 94.7 | 0 | MRM | — | |
| P14152 | Mdh1 | EVGVYEALK | BrainStem | — | 94.7 | 0 | MRM | — | |
| Q6PAR5 | Gapvd1 | ILEDTQFVDGYK | Cerebrum | — | 94.7 | 0 | MRM | — | |
| P05064 | Aldoa | ADDGRPFPQVIK | BrainStem | — | 94.7 | 0 | MRM | — | |
| Q80X90 | Flnb | DGTYAVTYIPDK | MockWholeBrain | — | 94.7 | 0 | MRM | — | |
| Q02819 | Nucb1 | LQAANAEDIK | BrainStem | — | 94.7 | 0 | MRM | — | |
| A0A0A6YX18 | Atp6v1h | GAVDAAVPTNIIAAK | BrainStem | — | 94.7 | 0 | MRM | — | |
| E9PYX7 | Afdn | LQLSVTEVGTEK | Cerebrum | — | 94.7 | 0 | MRM | — | |
| P26339 | Chga | ELQDLALQGAK | MockWholeBrain | — | 94.6 | 0 | MRM | — | |
| Q8BH95 | Echs1 | AFAAGADIK | Cerebellum | — | 94.6 | 0 | MRM | — | |
| P41241 | Csk | EGIIPANYVQK | BrainStem | — | 94.6 | 0 | MRM | — | |
| P10630 | Eif4a2 | ELAQQIQK | BrainStem | — | 94.6 | 0 | MRM | — | |
| P60843 | Eif4a1 | ELAQQIQK | BrainStem | — | 94.6 | 0 | MRM | — | |
| P63158 | Hmgb1 | GEHPGLSIGDVAK | MockWholeBrain | — | 94.6 | 0 | MRM | — | |
| Q9Z2I8 | Suclg2 | GVFNSGLK | Cerebrum | — | 94.5 | 0 | MRM | — | |
| P62259 | Ywhae | AAFDDAIAELDTLSEESYK | BrainStem | — | 94.5 | 0 | MRM | — | |
| P62259 | Ywhae | NLLSVAYK | Cerebellum | — | 94.5 | 0 | MRM | — | |
| P16125 | Ldhb | SADTLWDIQK | BrainStem | — | 94.5 | 0 | MRM | — | |
| Q07235 | Serpine2 | FTAVAQTDLK | MockWholeBrain | — | 94.5 | 0 | MRM | — | |
| Q8R0Y6 | Aldh1l1 | LQAGTVFVNTYNK | MockWholeBrain | — | 94.4 | 0 | MRM | — | |
| Q9CZY3 | Ube2v1 | LLEELEEGQK | BrainStem | — | 94.4 | 0 | MRM | — |