SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q60668	Hnrnpd	IFVGGLSPDTPEEK	liver	8.4	100.0	0	MRM	—
Q60930	Vdac2	YQLDPTASISAK	liver	1.2	100.0	0	MRM	—
Q61425	Hadh	TGEGFYK	liver	35.5	100.0	0	MRM	—
Q64433	Hspe1	VLLPEYGGTK	liver	69.0	100.0	0	MRM	—
Q6GT24	Prdx6	LAPEFAK	liver	88.0	100.0	0	MRM	—
Q6ZWV7	Rpl35	VLTVINQTQK	liver	1.5	100.0	0	MRM	—
Q71RI9	Kyat3	TFSVTGWK	liver	2.4	100.0	0	MRM	—
Q76MZ3	Ppp2r1a	IGPILDNSTLQSEVKPILEK	liver	0.3	100.0	0	MRM	—
Q80X81	Acat3	ELGLNPEK	liver	3.0	100.0	0	MRM	—
Q8BFR5	Tufm	TTLTAAITK	liver	8.7	100.0	0	MRM	—
Q8BGS7	Cept1	VIFTGGVGK	liver	0.2	100.0	0	MRM	—
Q8CAY6	Acat2	ELGLNPEK	liver	3.0	100.0	0	MRM	—
Q8JZR0	Acsl5	EAILEDLQK	liver	0.2	100.0	0	MRM	—
Q8VCN5	Cth	AVAALDGAK	liver	4.7	100.0	0	MRM	—
Q91XU3	Pip4k2c	DVEFLVQLK	liver	0.2	100.0	0	MRM	—
Q91Y97	Aldob	ALQASALAAWGGK	liver	160.1	100.0	0	MRM	—
Q91YT0	Ndufv1	EAYEAGLIGK	liver	2.8	100.0	0	MRM	—
Q91ZJ5	Ugp2	LVEIAQVPK	liver	1.5	100.0	0	MRM	—
Q921I1	Tf	GDVAFVK	liver	6.0	100.0	0	MRM	—
Q9CPR4	Rpl17	YSLDPENPTK	liver	139.1	100.0	0	MRM	—
Q9CPX6	Atg3	ALEVAEYLTPVLK	liver	2.2	100.0	0	MRM	—
Q9CR86	Carhsp1	LQAVEVVITHLAPGTK	liver	2.3	100.0	0	MRM	—
Q9CXW4	Rpl11	VLEQLTGQTPVFSK	liver	3.4	100.0	0	MRM	—
Q9CY50	Ssr1	FLVGFTNK	liver	4.0	100.0	0	MRM	—
Q9D0F3	Lman1	YQEEFEHFQQELDK	liver	1.3	100.0	0	MRM	—
Q9D1G2	Pmvk	LVLLFSGK	liver	0.1	100.0	0	MRM	—
Q9D1Q6	Erp44	NIIGYFEQK	liver	3.9	100.0	0	MRM	—
Q9D3D9	Atp5f1d	IEANEALVK	liver	54.3	100.0	0	MRM	—
Q9D892	Itpa	IVFVTGNAK	liver	0.2	100.0	0	MRM	—
Q9DB77	Uqcrc2	GIEAVGGK	liver	2.2	100.0	0	MRM	—
Q9DBP5	Cmpk1	NPDSQYGELIEK	liver	0.9	100.0	0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	liver	0.7	100.0	0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	liver	36.7	100.0	0	MRM	—
Q9EQF5	Dpys	FVAVTSTNAAK	liver	5.3	100.0	0	MRM	—
Q9JHI5	Ivd	QYVYNVAK	liver	2.2	100.0	0	MRM	—
Q9JII6	Akr1a1	EELFVTSK	liver	3.6	100.0	0	MRM	—
Q9JJU8	Sh3bgrl	VYIASSSGSTAIK	liver	1.7	100.0	0	MRM	—
Q9JLN9	Mtor	YHPQALIYPLTVASK	liver	0.1	100.0	0	MRM	—
Q9QY76	Vapb	VEQVLSLEPQHELK	liver	1.6	100.0	0	MRM	—
Q9QYF1	Rdh11	IHFHNLQGEK	liver	2.5	100.0	0	MRM	—
Q9QYG0	Ndrg2	LDPTQTSFLK	liver	0.8	100.0	0	MRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	liver	0.2	100.0	0	MRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	liver	0.1	100.0	0	MRM	—
Q9Z1Z2	Strap	TVDFTQDSNYLLTGGQDK	liver	2.2	100.0	0	MRM	—
Q9Z2I9	Sucla2	LSEIVTLAK	liver	2.7	100.0	0	MRM	—
A0A3Q4EBK4	Bin1	KLVDYDSAR	liver	0.1	100.0	1	MRM	—
A0JNY3	Gphn	DNLPPFPASVK	liver	1.2	99.1	0	MRM	—
O09167	Rpl21	GTWVQLK	liver	9.8	98.6	0	MRM	—
P14152	Mdh1	EVGVYEALK	liver	0.6	99.1	0	MRM	—
P54775	Psmc4	EAVELPLTHFELYK	liver	1.8	99.3	0	MRM	—

SysQuan Mouse Database

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