SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P34928	Apoc1	EFGNTLEDK	kidney	—	100.0	MRM+PRM	—
P34928	Apoc1	EFGNTLEDK	lung	—	100.0	MRM+PRM	—
P35235	Ptpn11	GVDGSFLARPSK	BrainStem	—	100.0	MRM+PRM	—
P35235	Ptpn11	GVDGSFLARPSK	Cerebellum	—	100.0	MRM+PRM	—
P35235	Ptpn11	GVDGSFLARPSK	Heart	—	100.0	MRM+PRM	—
P35235	Ptpn11	GVDGSFLARPSK	liver	—	100.0	MRM+PRM	—
P35235	Ptpn11	GVDGSFLARPSK	lung	—	100.0	MRM+PRM	—
P35278	Rab5c	QASPNIVIALAGNK	BoneMarrow	—	100.0	MRM+PRM	—
P35278	Rab5c	QASPNIVIALAGNK	BrainStem	—	100.0	MRM+PRM	—
P35278	Rab5c	QASPNIVIALAGNK	liver	—	100.0	MRM+PRM	—
P35278	Rab5c	QASPNIVIALAGNK	Pancreas	—	100.0	MRM+PRM	—
P35278	Rab5c	QASPNIVIALAGNK	plasma	—	100.0	MRM+PRM	—
P35278	Rab5c	QASPNIVIALAGNK	SalivaryGland	—	100.0	MRM+PRM	—
P35278	Rab5c	QASPNIVIALAGNK	SmallIntestines	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	BoneMarrow	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	BrainStem	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	Cerebellum	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	Cerebrum	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	lung	—	100.0	MRM+PRM	—
P35279	Rab6a	LVFLGEQSVGK	SmallIntestines	—	100.0	MRM+PRM	—
P35293	Rab18	IIQTPGLWESENQNK	BrainStem	—	100.0	MRM+PRM	—
P35293	Rab18	IIQTPGLWESENQNK	Cerebrum	—	100.0	MRM+PRM	—
P35293	Rab18	IIQTPGLWESENQNK	liver	—	100.0	MRM+PRM	—
P35293	Rab18	IIQTPGLWESENQNK	Spleen	—	100.0	MRM+PRM	—
P35293	Rab18	IIQTPGLWESENQNK	TailSkin	—	100.0	MRM+PRM	—
P35585	Ap1m1	ILQEYITQEGHK	BoneMarrow	—	100.0	MRM+PRM	—
P35585	Ap1m1	ILQEYITQEGHK	BrainStem	—	100.0	MRM+PRM	—
P35585	Ap1m1	ILQEYITQEGHK	kidney	—	100.0	MRM+PRM	—
P35585	Ap1m1	ILQEYITQEGHK	lung	—	100.0	MRM+PRM	—
P35585	Ap1m1	ILQEYITQEGHK	Pancreas	—	100.0	MRM+PRM	—
P35585	Ap1m1	ILQEYITQEGHK	SalivaryGland	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	BrainStem	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	Cerebellum	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	Cerebrum	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	Heart	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	kidney	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	liver	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	lung	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	SalivaryGland	—	100.0	MRM+PRM	—
P38647	Hspa9	EQQIVIQSSGGLSK	Spleen	—	100.0	MRM+PRM	—
P40124	Cap1	EFHTTGLAWSK	BoneMarrow	—	100.0	MRM+PRM	—
P40124	Cap1	EFHTTGLAWSK	Cerebellum	—	100.0	MRM+PRM	—
P40124	Cap1	EFHTTGLAWSK	Heart	—	100.0	MRM+PRM	—
P40124	Cap1	EFHTTGLAWSK	SmallIntestines	—	100.0	MRM+PRM	—
P40124	Cap1	EFHTTGLAWSK	Spleen	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	BrainStem	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	Cerebellum	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	Cerebrum	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	Heart	—	100.0	MRM+PRM	—
P40142	Tkt	HQPTAIIAK	liver	—	100.0	MRM+PRM	—

SysQuan Mouse Database

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