SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
E9PZ00	Psap	GCSFLPDPYQK	Cerebrum	—	—	MRM+PRM	['Cys']
E9Q414	Apob	MGLAFESTK	BrainStem	—	—	MRM+PRM	['Meth']
E9Q414	Apob	MGLAFESTK	Heart	—	—	MRM+PRM	['Meth']
E9Q414	Apob	MGLAFESTK	kidney	—	—	MRM+PRM	['Meth']
E9Q414	Apob	MGLAFESTK	kidney	—	—	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	Cerebellum	—	—	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	Cerebrum	—	—	MRM+PRM	['Meth']
E9QPU1	Vwf	VTGCPPFDEHK	plasma	—	—	MRM+PRM	['Cys']
F6ZFT1	Ndufab1	LSVNSHFMK	Heart	—	—	MRM+PRM	['Meth']
J3QNU6	Arrb1	ACGVDYEVK	kidney	—	—	MRM+PRM	['Cys']
O08553	Dpysl2	GLYDGPVCEVSVTPK	plasma	—	—	MRM+PRM	['Cys']
O08739	Ampd3	MLENIFLPLFK	Spleen	—	—	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	Muscle	—	—	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	SmallIntestines	—	—	MRM+PRM	['Meth']
O08749	Dld	ALLNNSHYYHMAHGK	Spermatozoa	—	—	MRM+PRM	['Meth']
O08749	Dld	IPNIYAIGDVVAGPMLAHK	plasma	—	—	MRM+PRM	['Meth']
O09061	Psmb1	TVIGCSGFHGDCLTLTK	TailSkin	—	—	MRM+PRM	['Cys']
O35969	Gamt	YYAFPQMITPLVTK	Spleen	—	—	MRM+PRM	['Meth']
O54890	Itgb3	GECLCGQCVCHSSDFGK	BrainStem	—	—	MRM+PRM	['Cys']
O70252	Hmox2	YMGDLSGGQVLK	kidney	—	—	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	Muscle	—	—	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	Pancreas	—	—	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	SalivaryGland	—	—	MRM+PRM	['Meth']
O70325	Gpx4	ICVNGDDAHPLWK	BoneMarrow	—	—	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	Pancreas	—	—	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	Pancreas	—	—	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	plasma	—	—	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	Thymus	—	—	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	TailSkin	—	—	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	plasma	—	—	MRM+PRM	['Cys']
O88587	Comt	YDVDTLDMVFLDHWK	BoneMarrow	—	—	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Cerebellum	—	—	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Cerebrum	—	—	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	LymphNodes	—	—	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	SalivaryGland	—	—	MRM+PRM	['Meth']
O88783	F5	FCENPDEVK	plasma	—	—	MRM+PRM	['Cys']
O88844	Idh1	SIEDFAHSSFQMALSK	TailSkin	—	—	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	BrainStem	—	—	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	kidney	—	—	MRM+PRM	['Meth']
O88958	Gnpda1	TVFVCDEDATLELK	plasma	—	—	MRM+PRM	['Cys']
P00329	Adh1	VCLIGCGFSTGYGSAVK	Pancreas	—	—	MRM+PRM	['Cys']
P00329	Adh1	VCLIGCGFSTGYGSAVK	TailSkin	—	—	MRM+PRM	['Cys']
P01027	C3	ADIGCTPGSGK	BrainStem	—	—	MRM+PRM	['Cys']
P01027	C3	ADIGCTPGSGK	Pancreas	—	—	MRM+PRM	['Cys']
P01027	C3	ADIGCTPGSGK	SmallIntestines	—	—	MRM+PRM	['Cys']
P04202	Tgfb1	ALDTNYCFSSTEK	kidney	—	—	MRM+PRM	['Cys']
P04202	Tgfb1	ALDTNYCFSSTEK	plasma	—	—	MRM+PRM	['Cys']
P05063	Aldoc	GILAADESVGSMAK	Heart	—	—	MRM+PRM	['Meth']
P05063	Aldoc	GILAADESVGSMAK	lung	—	—	MRM+PRM	['Meth']
P05063	Aldoc	GILAADESVGSMAK	Muscle	—	—	MRM+PRM	['Meth']

SysQuan Mouse Database

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