SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O55143	Atp2a2	VGEATETALTCLVEK	Thyroid	—	80.3	MRM+PRM	['Cys']
P00329	Adh1	VCLIGCGFSTGYGSAVK	Thymus	—	80.0	MRM+PRM	['Cys']
P35486	Pdha1	MVNSNLASVEELK	SalivaryGland	—	80.1	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	SmallIntestines	—	79.6	MRM+PRM	['Meth']
P35991	Btk	NCLVNDQGVVK	BoneMarrow	—	80.1	MRM+PRM	['Cys']
P63001	Rac1	CVVVGDGAVGK	SmallIntestines	—	80.1	MRM+PRM	['Cys']
Q01853	Vcp	AIANECQANFISIK	Spermatozoa	—	80.3	MRM+PRM	['Cys']
Q02053	Uba1	SIPICTLK	BoneMarrow	—	80.4	MRM+PRM	['Cys']
A0AAQ4VMY7	Dpysl2	GLYDGPVCEVSVTPK	lung	—	79.1	MRM+PRM	['Cys']
P11983	Tcp1	ICDDELILIK	Pancreas	—	79.1	MRM+PRM	['Cys']
P35486	Pdha1	MVNSNLASVEELK	Spermatozoa	—	79.2	MRM+PRM	['Meth']
P47856	Gfpt1	AVQTLQMELQQIMK	Thymus	—	79.2	MRM+PRM	['Meth']
P53395	Dbt	LAMENNIK	BrainStem	—	79.0	MRM+PRM	['Meth']
P53395	Dbt	LAMENNIK	LymphNodes	—	79.3	MRM+PRM	['Meth']
P63001	Rac1	CVVVGDGAVGK	Thymus	—	78.9	MRM+PRM	['Cys']
Q9WUM5	Suclg1	IGIMPGHIHK	Spermatozoa	—	78.5	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	BoneMarrow	—	78.0	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	liver	—	77.8	MRM+PRM	['Meth']
P47791	Gsr	LGGTCVNVGCVPK	Heart	—	77.6	MRM+PRM	['Cys']
P61161	Actr2	LCYVGYNIEQEQK	Muscle	—	77.9	MRM+PRM	['Cys']
Q3T9S7	Pcx	AYVEANQMLGDLIK	liver	—	78.3	MRM+PRM	['Meth']
Q64737	Gart	AVQEIMQEK	LymphNodes	—	78.2	MRM+PRM	['Meth']
Q8BH86	Dglucy	IPGISSTGVGDGGNELGMGK	LymphNodes	—	77.6	MRM+PRM	['Meth']
Q8BHF7	Pgs1	VLSSPAEFFELMK	Spermatozoa	—	77.7	MRM+PRM	['Meth']
Q9JHK5	Plek	GSTLTSPCQDFGK	liver	—	78.2	MRM+PRM	['Cys']
Q9R111	Gda	FVSEMLQK	BoneMarrow	—	78.0	MRM+PRM	['Meth']
O70325	Gpx4	ICVNGDDAHPLWK	Thymus	—	76.5	MRM+PRM	['Cys']
P19157	Gstp1	MLLADQGQSWK	plasma	—	76.8	MRM+PRM	['Meth']
P68369	Tuba1a	TIQFVDWCPTGFK	Cerebellum	—	77.0	MRM+PRM	['Cys']
Q61830	Mrc1	WENLECVQK	LymphNodes	—	77.1	MRM+PRM	['Cys']
Q8R0Y6	Aldh1l1	SPLIIFADCDLNK	LymphNodes	—	77.4	MRM+PRM	['Cys']
Q91ZA3	Pcca	EAGGNMSIQFLGTVYK	Cerebrum	—	77.3	MRM+PRM	['Meth']
Q99KK2	Cmas	HLIEMGYLQGGK	Pancreas	—	77.0	MRM+PRM	['Meth']
Q99LC5	Etfa	LGGEVSCLVAGTK	kidney	—	77.2	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	Thymus	—	76.3	MRM+PRM	['Cys']
P24527	Lta4h	AILPCQDTPSVK	Thymus	—	75.8	MRM+PRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	BrainStem	—	76.3	MRM+PRM	['Cys']
Q62261	Sptbn1	FLQDCQELSLWINEK	SalivaryGland	—	75.9	MRM+PRM	['Cys']
P46425	Gstp2	MLLADQGQSWK	Cerebellum	—	75.4	MRM+PRM	['Meth']
Q68FD5	Cltc	AHIAQLCEK	Spermatozoa	—	74.9	MRM+PRM	['Cys']
Q7TNC9	Inpp5a	EIYSDTLESTPMLEK	kidney	—	75.3	MRM+PRM	['Meth']
Q8VDD5	Myh9	EDQSILCTGESGAGK	Thymus	—	74.8	MRM+PRM	['Cys']
Q99LC5	Etfa	LGGEVSCLVAGTK	Spleen	—	75.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	Heart	—	73.7	MRM+PRM	['Cys']
P42932	Cct8	QITSYGETCPGLEQYAIK	BrainStem	—	74.1	MRM+PRM	['Cys']
P51881	Slc25a5	GLGDCLVK	Spleen	—	73.6	MRM+PRM	['Cys']
P63001	Rac1	CVVVGDGAVGK	BrainStem	—	74.5	MRM+PRM	['Cys']
P84096	Rhog	CVVVGDGAVGK	BrainStem	—	74.5	MRM+PRM	['Cys']
Q91ZJ5	Ugp2	TYNTDVPLVLMNSFNTDEDTK	Pancreas	—	74.2	MRM+PRM	['Meth']
Q9Z1Q5	Clic1	FLDGNELTLADCNLLPK	SalivaryGland	—	74.4	MRM+PRM	['Cys']

SysQuan Mouse Database

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