SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q91V92	Acly	AFDSGIIPMEFVNK	Thyroid	—	84.3	MRM+PRM	['Meth']
Q99JY0	Hadhb	ALAMGYKPK	Heart	—	83.8	MRM+PRM	['Meth']
Q99KK2	Cmas	HLIEMGYLQGGK	SmallIntestines	—	84.4	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	BrainStem	—	84.0	MRM+PRM	['Meth']
Q9DBJ1	Pgam1	YADLTEDQLPSCESLK	Heart	—	84.5	MRM+PRM	['Cys']
Q9DCL9	Paics	EVTPEGLQMVK	Pancreas	—	84.4	MRM+PRM	['Meth']
Q9DCL9	Paics	EVTPEGLQMVK	Thymus	—	84.0	MRM+PRM	['Meth']
Q9ERS2	Ndufa13	ENLEEEAIIMK	Heart	—	84.0	MRM+PRM	['Meth']
Q9JHK5	Plek	GSTLTSPCQDFGK	Heart	—	84.2	MRM+PRM	['Cys']
Q9WTP6	Ak2	LVSDEMVVELIEK	Thymus	—	84.4	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	Heart	—	83.5	MRM+PRM	['Meth']
O88958	Gnpda1	TVFVCDEDATLELK	LymphNodes	—	82.6	MRM+PRM	['Cys']
P49586	Pcyt1a	EFIGSFLEMFGPEGALK	BrainStem	—	82.5	MRM+PRM	['Meth']
P61161	Actr2	LCYVGYNIEQEQK	plasma	—	82.9	MRM+PRM	['Cys']
Q64737	Gart	AVQEIMQEK	Thyroid	—	82.7	MRM+PRM	['Meth']
Q68FD5	Cltc	AHIAQLCEK	BoneMarrow	—	83.2	MRM+PRM	['Cys']
Q8BTM8	Flna	TPCEEILVK	kidney	—	82.9	MRM+PRM	['Cys']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	BoneMarrow	—	83.2	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	kidney	—	83.3	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	SmallIntestines	—	83.4	MRM+PRM	['Meth']
Q9WTP6	Ak2	LVSDEMVVELIEK	LymphNodes	—	82.9	MRM+PRM	['Meth']
O70325	Gpx4	ICVNGDDAHPLWK	Spleen	—	82.2	MRM+PRM	['Cys']
P00329	Adh1	VCLIGCGFSTGYGSAVK	Muscle	—	82.2	MRM+PRM	['Cys']
P01027	C3	ACEPGVDYVYK	Heart	—	82.5	MRM+PRM	['Cys']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	Cerebrum	—	82.3	MRM+PRM	['Meth']
P18760	Cfl1	AVLFCLSEDK	LymphNodes	—	81.6	MRM+PRM	['Cys']
P35486	Pdha1	MVNSNLASVEELK	Pancreas	—	81.9	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	Thymus	—	82.2	MRM+PRM	['Meth']
P50516	Atp6v1a	DFPELTMEVDGK	BrainStem	—	81.9	MRM+PRM	['Meth']
P99029	Prdx5	GVLFGVPGAFTPGCSK	BoneMarrow	—	82.2	MRM+PRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	SmallIntestines	—	82.1	MRM+PRM	['Cys']
Q3UZ14	Eef2	DLEEDHACIPIK	BrainStem	—	81.7	MRM+PRM	['Cys']
Q64737	Gart	AVQEIMQEK	SmallIntestines	—	81.6	MRM+PRM	['Meth']
Q68FD5	Cltc	AHIAQLCEK	Thyroid	—	81.6	MRM+PRM	['Cys']
Q8BTM8	Flna	TPCEEILVK	Cerebrum	—	82.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	LymphNodes	—	82.3	MRM+PRM	['Cys']
Q8QZT1	Acat1	MLEIDPQK	Spleen	—	82.4	MRM+PRM	['Meth']
Q99LD8	Ddah2	LSDVTLVPVSCSELEK	Spleen	—	82.4	MRM+PRM	['Cys']
P16858	Gapdh	VIISAPSADAPMFVMGVNHEK	LymphNodes	—	80.7	MRM+PRM	['Meth']
P60335	Pcbp1	AITIAGVPQSVTECVK	Spleen	—	80.8	MRM+PRM	['Cys']
P60335	Pcbp1	AITIAGVPQSVTECVK	Thyroid	—	81.3	MRM+PRM	['Cys']
P61161	Actr2	LCYVGYNIEQEQK	BrainStem	—	80.8	MRM+PRM	['Cys']
P63001	Rac1	CVVVGDGAVGK	LymphNodes	—	81.4	MRM+PRM	['Cys']
Q00612	G6pdx	GPTEADELMK	Cerebrum	—	80.9	MRM+PRM	['Meth']
Q04447	Ckb	LGFSEVELVQMVVDGVK	Spleen	—	81.1	MRM+PRM	['Meth']
Q60930	Vdac2	WCEYGLTFTEK	Heart	—	80.7	MRM+PRM	['Cys']
Q68FD5	Cltc	AHIAQLCEK	LymphNodes	—	80.9	MRM+PRM	['Cys']
Q8VDD5	Myh9	EDQSILCTGESGAGK	BoneMarrow	—	81.3	MRM+PRM	['Cys']
Q99LD8	Ddah2	LSDVTLVPVSCSELEK	SmallIntestines	—	81.0	MRM+PRM	['Cys']
G3UX26	Vdac2	WCEYGLTFTEK	Cerebrum	—	80.5	MRM+PRM	['Cys']

SysQuan Mouse Database

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