SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q68FD5	Cltc	AHIAQLCEK	SmallIntestines	—	86.7	MRM+PRM	['Cys']
Q9CZS1	Aldh1b1	LAPALATGNTVVMK	kidney	—	87.0	MRM+PRM	['Meth']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	Pancreas	—	87.4	MRM+PRM	['Meth']
Q9R1P0	Psma4	YLLQYQEPIPCEQLVTALCDIK	Spermatozoa	—	87.2	MRM+PRM	['Cys']
Q9WTP6	Ak2	LVSDEMVVELIEK	BoneMarrow	—	87.4	MRM+PRM	['Meth']
O55143	Atp2a2	VGEATETALTCLVEK	Spermatozoa	—	86.3	MRM+PRM	['Cys']
P11983	Tcp1	IACLDFSLQK	Heart	—	86.1	MRM+PRM	['Cys']
P17751	Tpi1	VTNGAFTGEISPGMIK	LymphNodes	—	85.6	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	Thymus	—	85.8	MRM+PRM	['Meth']
P24527	Lta4h	AILPCQDTPSVK	LymphNodes	—	85.7	MRM+PRM	['Cys']
P35235	Ptpn11	GVDCDIDVPK	BoneMarrow	—	86.5	MRM+PRM	['Cys']
Q3UEA1	Acly	AFDSGIIPMEFVNK	liver	—	85.9	MRM+PRM	['Meth']
Q60864	Stip1	DCEECIQLEPTFIK	Muscle	—	85.8	MRM+PRM	['Cys']
Q61739	Itga6	FGSCQQGVAATFTK	BoneMarrow	—	86.3	MRM+PRM	['Cys']
Q62261	Sptbn1	FLQDCQELSLWINEK	SmallIntestines	—	85.9	MRM+PRM	['Cys']
Q68FD5	Cltc	AHIAQLCEK	Pancreas	—	86.3	MRM+PRM	['Cys']
Q8BTM8	Flna	TPCEEILVK	BoneMarrow	—	85.9	MRM+PRM	['Cys']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	Cerebrum	—	86.0	MRM+PRM	['Meth']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	Muscle	—	86.1	MRM+PRM	['Meth']
Q9QUK9	Try5	TLNNDIMLIK	Pancreas	—	86.2	MRM+PRM	['Meth']
P01027	C3	ACEPGVDYVYK	SalivaryGland	—	85.0	MRM+PRM	['Cys']
P11983	Tcp1	ICDDELILIK	Thymus	—	85.1	MRM+PRM	['Cys']
P42932	Cct8	QITSYGETCPGLEQYAIK	Spermatozoa	—	85.4	MRM+PRM	['Cys']
P57722	Pcbp3	LVVPASQCGSLIGK	Spermatozoa	—	85.3	MRM+PRM	['Cys']
P60766	Cdc42	CVVVGDGAVGK	Thymus	—	84.6	MRM+PRM	['Cys']
P61082	Ube2m	LVICPDEGFYK	LymphNodes	—	84.8	MRM+PRM	['Cys']
P61161	Actr2	LCYVGYNIEQEQK	SmallIntestines	—	85.3	MRM+PRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	Spleen	—	85.1	MRM+PRM	['Cys']
Q04447	Ckb	LEQGQAIDDLMPAQK	Pancreas	—	85.0	MRM+PRM	['Meth']
Q60864	Stip1	DCEECIQLEPTFIK	Thyroid	—	84.8	MRM+PRM	['Cys']
Q8BH95	Echs1	EGMTAFVEK	BrainStem	—	85.0	MRM+PRM	['Meth']
Q922D8	Mthfd1	GDLNDCFIPCTPK	plasma	—	85.1	MRM+PRM	['Cys']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	LymphNodes	—	84.6	MRM+PRM	['Meth']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	Thyroid	—	84.7	MRM+PRM	['Meth']
Q99LC5	Etfa	TIYAGNALCTVK	Spleen	—	85.4	MRM+PRM	['Cys']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	Thyroid	—	84.6	MRM+PRM	['Meth']
Q9DCL9	Paics	EVTPEGLQMVK	kidney	—	84.9	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	LymphNodes	—	85.0	MRM+PRM	['Meth']
E9Q559	Atp2a3	VGEATETALTCLVEK	SalivaryGland	—	84.0	MRM+PRM	['Cys']
O70252	Hmox2	YMGDLSGGQVLK	lung	—	83.9	MRM+PRM	['Meth']
P11983	Tcp1	IACLDFSLQK	kidney	—	84.5	MRM+PRM	['Cys']
P11983	Tcp1	IACLDFSLQK	Spermatozoa	—	84.5	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	Thyroid	—	84.4	MRM+PRM	['Cys']
P35486	Pdha1	MVNSNLASVEELK	LymphNodes	—	84.3	MRM+PRM	['Meth']
P60766	Cdc42	CVVVGDGAVGK	SmallIntestines	—	84.0	MRM+PRM	['Cys']
P61161	Actr2	LCYVGYNIEQEQK	Thyroid	—	84.3	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Spleen	—	83.8	MRM+PRM	['Cys']
Q8C0I1	Agps	ESISDVGFGMLK	BoneMarrow	—	84.2	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	Heart	—	83.8	MRM+PRM	['Meth']
Q8VCT3	Rnpep	AFFPCFDTPAVK	kidney	—	84.4	MRM+PRM	['Cys']

SysQuan Mouse Database

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