SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P68368	Tuba4a	SIQFVDWCPTGFK	Spermatozoa	—	88.9	MRM+PRM	['Cys']
Q01853	Vcp	AIANECQANFISIK	Thymus	—	88.5	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Cerebellum	—	88.6	MRM+PRM	['Cys']
Q68FD5	Cltc	AHIAQLCEK	SalivaryGland	—	88.5	MRM+PRM	['Cys']
Q6ZPR5	Smpd4	VFAQPNLAEMIQK	Cerebrum	—	88.7	MRM+PRM	['Meth']
Q8VCT3	Rnpep	AFFPCFDTPAVK	BoneMarrow	—	89.0	MRM+PRM	['Cys']
Q91V92	Acly	GVTIIGPATVGGIKPGCFK	BoneMarrow	—	89.2	MRM+PRM	['Cys']
Q91ZA3	Pcca	EAGGNMSIQFLGTVYK	Heart	—	88.7	MRM+PRM	['Meth']
Q920N2	Hlcs	FMAYLSQGGK	Cerebrum	—	89.1	MRM+PRM	['Meth']
Q922D8	Mthfd1	GDILVVATGQPEMVK	Cerebellum	—	88.6	MRM+PRM	['Meth']
Q99K67	Aass	DAGYEISLGLMPK	Cerebellum	—	89.1	MRM+PRM	['Meth']
Q99LC5	Etfa	TIYAGNALCTVK	BoneMarrow	—	89.2	MRM+PRM	['Cys']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	LymphNodes	—	89.1	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	Heart	—	88.7	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	Spleen	—	89.1	MRM+PRM	['Meth']
Q9JHK5	Plek	GSTLTSPCQDFGK	BoneMarrow	—	88.7	MRM+PRM	['Cys']
Q9QUI0	Rhoa	HFCPNVPIILVGNK	Spermatozoa	—	89.3	MRM+PRM	['Cys']
E9PZ00	Psap	GCSFLPDPYQK	liver	—	88.4	MRM+PRM	['Cys']
E9QB02	Mars1	NPEQVDLYQFMAK	BrainStem	—	88.5	MRM+PRM	['Meth']
O55143	Atp2a2	VGEATETALTCLVEK	Thymus	—	88.3	MRM+PRM	['Cys']
P01027	C3	ACEPGVDYVYK	kidney	—	88.1	MRM+PRM	['Cys']
P24527	Lta4h	AILPCQDTPSVK	SmallIntestines	—	87.7	MRM+PRM	['Cys']
P35235	Ptpn11	GVDCDIDVPK	BrainStem	—	87.7	MRM+PRM	['Cys']
P53395	Dbt	LAMENNIK	Cerebellum	—	87.7	MRM+PRM	['Meth']
P58252	Eef2	DLEEDHACIPIK	LymphNodes	—	87.7	MRM+PRM	['Cys']
P61750	Arf4	NICFTVWDVGGQDK	BrainStem	—	87.6	MRM+PRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	SalivaryGland	—	88.3	MRM+PRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	BrainStem	—	87.6	MRM+PRM	['Cys']
Q68FD5	Cltc	AHIAQLCEK	Thymus	—	88.0	MRM+PRM	['Cys']
Q8BH86	Dglucy	IPGISSTGVGDGGNELGMGK	SalivaryGland	—	88.3	MRM+PRM	['Meth']
Q8BTM8	Flna	TPCEEILVK	Cerebellum	—	88.1	MRM+PRM	['Cys']
Q8BVY8	Cct8	QITSYGETCPGLEQYAIK	BrainStem	—	88.0	MRM+PRM	['Cys']
Q8CFX1	H6pd	WEGVPFILMSGK	SmallIntestines	—	87.5	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	Cerebellum	—	88.0	MRM+PRM	['Meth']
Q91ZA3	Pcca	EAGGNMSIQFLGTVYK	SalivaryGland	—	87.9	MRM+PRM	['Meth']
Q922D8	Mthfd1	GDLNDCFIPCTPK	LymphNodes	—	87.7	MRM+PRM	['Cys']
Q99JY9	Actr3	LPACVVDCGTGYTK	Thyroid	—	88.1	MRM+PRM	['Cys']
Q9JHK5	Plek	GSTLTSPCQDFGK	plasma	—	88.5	MRM+PRM	['Cys']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	Spermatozoa	—	88.4	MRM+PRM	['Meth']
Q9Z1Q5	Clic1	FLDGNELTLADCNLLPK	Spleen	—	88.2	MRM+PRM	['Cys']
Q9Z1Q5	Clic1	FLDGNELTLADCNLLPK	Thymus	—	87.7	MRM+PRM	['Cys']
Q9Z1Q5	Clic1	FLDGNELTLADCNLLPK	Thyroid	—	88.3	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	BrainStem	—	87.2	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	SmallIntestines	—	87.3	MRM+PRM	['Cys']
P40124	Cap1	TDGCHAYLSK	BoneMarrow	—	86.6	MRM+PRM	['Cys']
P60766	Cdc42	CVVVGDGAVGK	BoneMarrow	—	87.1	MRM+PRM	['Cys']
P61082	Ube2m	LVICPDEGFYK	Spleen	—	86.6	MRM+PRM	['Cys']
P84096	Rhog	CVVVGDGAVGK	LymphNodes	—	86.5	MRM+PRM	['Cys']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	SmallIntestines	—	86.8	MRM+PRM	['Meth']
Q3TR40	Thbs1	LCNNPTPQFGGK	BoneMarrow	—	86.5	MRM+PRM	['Cys']

SysQuan Mouse Database

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