SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q99JY9	Actr3	LGYAGNTEPQFIIPSCIAIK	SmallIntestines	—	91.1	MRM+PRM	['Cys']
Q99JY9	Actr3	LPACVVDCGTGYTK	BrainStem	—	90.6	MRM+PRM	['Cys']
Q9D1A2	Cndp2	NVMLLPVGSADDGAHSQNEK	Thymus	—	91.3	MRM+PRM	['Meth']
Q9DBT5	Ampd2	NSVLMSGFSHK	BoneMarrow	—	91.0	MRM+PRM	['Meth']
Q9JK38	Gnpnat1	VLGQLTETGVVSPEQFMK	BoneMarrow	—	91.2	MRM+PRM	['Meth']
Q9WUM5	Suclg1	IGIMPGHIHK	SmallIntestines	—	90.8	MRM+PRM	['Meth']
O55143	Atp2a2	VGEATETALTCLVEK	Pancreas	—	90.3	MRM+PRM	['Cys']
O70252	Hmox2	YMGDLSGGQVLK	Spleen	—	89.9	MRM+PRM	['Meth']
P14152	Mdh1	VIVVGNPANTNCLTASK	kidney	—	90.3	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	BoneMarrow	—	90.2	MRM+PRM	['Cys']
P28474	Adh5	VCLLGCGISTGYGAAVNTAK	plasma	—	90.1	MRM+PRM	['Cys']
P28654	Dcn	VVQCSDLGLDK	kidney	—	89.5	MRM+PRM	['Cys']
P35486	Pdha1	MVNSNLASVEELK	BrainStem	—	90.2	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	Thyroid	—	90.2	MRM+PRM	['Meth']
P40124	Cap1	CVNTTLQIK	LymphNodes	—	90.4	MRM+PRM	['Cys']
P40124	Cap1	TDGCHAYLSK	LymphNodes	—	89.8	MRM+PRM	['Cys']
P47791	Gsr	LGGTCVNVGCVPK	Thymus	—	89.8	MRM+PRM	['Cys']
P48193	Epb41	VSLLDDTVYECVVEK	BoneMarrow	—	89.9	MRM+PRM	['Cys']
P60335	Pcbp1	AITIAGVPQSVTECVK	Spermatozoa	—	90.1	MRM+PRM	['Cys']
P61082	Ube2m	LVICPDEGFYK	Pancreas	—	90.5	MRM+PRM	['Cys']
P61161	Actr2	LCYVGYNIEQEQK	Thymus	—	90.4	MRM+PRM	['Cys']
P63017	Hspa8	VCNPIITK	Spermatozoa	—	89.6	MRM+PRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	Heart	—	89.6	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Thyroid	—	89.8	MRM+PRM	['Cys']
Q3V117	Acly	GVTIIGPATVGGIKPGCFK	BoneMarrow	—	89.9	MRM+PRM	['Cys']
Q61316	Hspa4	GCALQCAILSPAFK	Cerebellum	—	89.5	MRM+PRM	['Cys']
Q68FL6	Mars1	NPEQVDLYQFMAK	BoneMarrow	—	90.3	MRM+PRM	['Meth']
Q7TNC9	Inpp5a	EIYSDTLESTPMLEK	Heart	—	89.6	MRM+PRM	['Meth']
Q80YX1	Tnc	ACGCAAAPDVK	Cerebellum	—	89.7	MRM+PRM	['Cys']
Q8BH86	Dglucy	IPGISSTGVGDGGNELGMGK	Muscle	—	90.0	MRM+PRM	['Meth']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	SalivaryGland	—	89.7	MRM+PRM	['Cys']
Q8QZT1	Acat1	MLEIDPQK	Cerebrum	—	90.1	MRM+PRM	['Meth']
Q8VCT3	Rnpep	AFFPCFDTPAVK	Thymus	—	90.2	MRM+PRM	['Cys']
Q91YI0	Asl	EFSFVQLSDAYSTGSSLMPQK	Pancreas	—	90.0	MRM+PRM	['Meth']
Q91ZA3	Pcca	EAGGNMSIQFLGTVYK	liver	—	90.2	MRM+PRM	['Meth']
Q91ZJ5	Ugp2	TYNTDVPLVLMNSFNTDEDTK	BoneMarrow	—	90.3	MRM+PRM	['Meth']
Q9D2G2	Dlst	LGFMSAFVK	BrainStem	—	90.3	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	LymphNodes	—	89.6	MRM+PRM	['Meth']
Q9D7X8	Ggct	SYLMTNYESAPPSPQYK	Thyroid	—	90.3	MRM+PRM	['Meth']
Q9QUI0	Rhoa	HFCPNVPIILVGNK	Muscle	—	89.5	MRM+PRM	['Cys']
Q9QUI0	Rhoa	LVIVGDGACGK	BrainStem	—	90.2	MRM+PRM	['Cys']
D3Z6F5	Atp5f1a	NVQAEEMVEFSSGLK	Cerebellum	—	89.5	MRM+PRM	['Meth']
O55143	Atp2a2	VGEATETALTCLVEK	SalivaryGland	—	88.6	MRM+PRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	SmallIntestines	—	89.0	MRM+PRM	['Cys']
P11276	Fn1	GEWTCKPIAEK	kidney	—	89.1	MRM+PRM	['Cys']
P18760	Cfl1	AVLFCLSEDK	kidney	—	88.7	MRM+PRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	Pancreas	—	89.4	MRM+PRM	['Cys']
P47856	Gfpt1	AVQTLQMELQQIMK	SalivaryGland	—	89.4	MRM+PRM	['Meth']
P58252	Eef2	DLEEDHACIPIK	Thyroid	—	89.0	MRM+PRM	['Cys']
P60766	Cdc42	CVVVGDGAVGK	Pancreas	—	89.3	MRM+PRM	['Cys']

SysQuan Mouse Database

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