SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q00612	G6pdx	GPTEADELMK	LymphNodes	—	93.5	MRM+PRM	['Meth']
Q00612	G6pdx	GPTEADELMK	Muscle	—	92.9	MRM+PRM	['Meth']
Q01279	Egfr	NLCYANTINWK	Cerebrum	—	93.1	MRM+PRM	['Cys']
Q04447	Ckb	LEQGQAIDDLMPAQK	Muscle	—	92.5	MRM+PRM	['Meth']
Q5EBQ0	Vdac3	CNTPTYCDLGK	BrainStem	—	92.6	MRM+PRM	['Cys']
Q61739	Itga6	FGSCQQGVAATFTK	SalivaryGland	—	93.1	MRM+PRM	['Cys']
Q61830	Mrc1	WENLECVQK	SalivaryGland	—	93.2	MRM+PRM	['Cys']
Q62009	Postn	DQGPNVCALQQILGTK	kidney	—	92.7	MRM+PRM	['Cys']
Q64737	Gart	AVQEIMQEK	liver	—	92.8	MRM+PRM	['Meth']
Q68FD5	Cltc	VIQCFAETGQVQK	BrainStem	—	93.5	MRM+PRM	['Cys']
Q6ZPJ3	Ube2o	LIGTNCIIYPVNSK	BoneMarrow	—	92.6	MRM+PRM	['Cys']
Q7TPR4	Actn1	ICDQWDNLGALTQK	SalivaryGland	—	92.7	MRM+PRM	['Cys']
Q80XI4	Pip4k2b	FFGPGEFDPSVDVYAMK	Thymus	—	93.2	MRM+PRM	['Meth']
Q8BTM8	Flna	VTYCPTEPGNYIINIK	SalivaryGland	—	93.2	MRM+PRM	['Cys']
Q8C196	Cps1	EVEMDAVGK	SmallIntestines	—	93.1	MRM+PRM	['Meth']
Q8VCT3	Rnpep	VGEGPGVCWLAPEQTAGK	LymphNodes	—	92.7	MRM+PRM	['Cys']
Q922D8	Mthfd1	GDLNDCFIPCTPK	Thymus	—	92.7	MRM+PRM	['Cys']
Q99K67	Aass	TVGLPTAMAAK	Cerebellum	—	93.4	MRM+PRM	['Meth']
Q99L13	Hibadh	TPVGFIGLGNMGNPMAK	Muscle	—	92.6	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	SmallIntestines	—	93.4	MRM+PRM	['Meth']
Q9D6R2	Idh3a	MSDGLFLQK	Thymus	—	93.1	MRM+PRM	['Meth']
Q9DBJ1	Pgam1	YADLTEDQLPSCESLK	Spermatozoa	—	93.4	MRM+PRM	['Cys']
Q9DCL9	Paics	EVTPEGLQMVK	lung	—	93.4	MRM+PRM	['Meth']
Q9JHK5	Plek	GSTLTSPCQDFGK	lung	—	92.8	MRM+PRM	['Cys']
Q9QUI0	Rhoa	LVIVGDGACGK	Spermatozoa	—	92.8	MRM+PRM	['Cys']
Q9R111	Gda	FVSEMLQK	SmallIntestines	—	93.1	MRM+PRM	['Meth']
Q9WVQ5	Apip	YDDMLVVPIIENTPEEK	Pancreas	—	92.6	MRM+PRM	['Meth']
A2AEX6	Fhl1	GEDFYCVTCHETK	kidney	—	92.2	MRM+PRM	['Cys']
G3UX26	Vdac2	WCEYGLTFTEK	BrainStem	—	92.3	MRM+PRM	['Cys']
P01027	C3	ADIGCTPGSGK	lung	—	91.7	MRM+PRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	plasma	—	91.9	MRM+PRM	['Cys']
P15327	Bpgm	FCSWVDQK	Muscle	—	91.6	MRM+PRM	['Cys']
P24527	Lta4h	AILPCQDTPSVK	BrainStem	—	91.8	MRM+PRM	['Cys']
P26039	Tln1	QELAVFCSPEPPAK	Spleen	—	91.5	MRM+PRM	['Cys']
P26443	Glud1	ALASLMTYK	Spermatozoa	—	92.1	MRM+PRM	['Meth']
P28474	Adh5	VCLLGCGISTGYGAAVNTAK	Spermatozoa	—	91.9	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	SalivaryGland	—	91.9	MRM+PRM	['Cys']
P51881	Slc25a5	GLGDCLVK	Muscle	—	92.5	MRM+PRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	Thymus	—	92.4	MRM+PRM	['Cys']
P60335	Pcbp1	AITIAGVPQSVTECVK	SalivaryGland	—	92.0	MRM+PRM	['Cys']
P60335	Pcbp1	LVVPATQCGSLIGK	plasma	—	91.6	MRM+PRM	['Cys']
P60766	Cdc42	YVECSALTQK	TailSkin	—	91.7	MRM+PRM	['Cys']
P61750	Arf4	NICFTVWDVGGQDK	Pancreas	—	92.0	MRM+PRM	['Cys']
P63017	Hspa8	VCNPIITK	plasma	—	92.2	MRM+PRM	['Cys']
P63101	Ywhaz	DICNDVLSLLEK	LymphNodes	—	91.7	MRM+PRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	SmallIntestines	—	91.7	MRM+PRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	Spermatozoa	—	92.5	MRM+PRM	['Cys']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	BrainStem	—	92.5	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	BoneMarrow	—	92.0	MRM+PRM	['Meth']
Q3V117	Acly	AFDSGIIPMEFVNK	Thyroid	—	91.8	MRM+PRM	['Meth']

SysQuan Mouse Database

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