SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P47791	Gsr	LGGTCVNVGCVPK	SalivaryGland	—	94.4	MRM+PRM	['Cys']
P57780	Actn4	CQLEINFNTLQTK	LymphNodes	—	93.7	MRM+PRM	['Cys']
P60766	Cdc42	CVVVGDGAVGK	SalivaryGland	—	94.3	MRM+PRM	['Cys']
P61161	Actr2	LCYVGYNIEQEQK	BoneMarrow	—	93.8	MRM+PRM	['Cys']
P62334	Psmc6	AVASQLDCNFLK	LymphNodes	—	93.8	MRM+PRM	['Cys']
P62334	Psmc6	AVASQLDCNFLK	SalivaryGland	—	94.0	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	LymphNodes	—	93.8	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	Thyroid	—	93.6	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	Heart	—	93.6	MRM+PRM	['Cys']
P68369	Tuba1a	TIQFVDWCPTGFK	Pancreas	—	94.0	MRM+PRM	['Cys']
P68373	Tuba1c	TIQFVDWCPTGFK	Pancreas	—	93.7	MRM+PRM	['Cys']
Q05920	Pc	AYVEANQMLGDLIK	SmallIntestines	—	94.4	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	Muscle	—	94.3	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	Thyroid	—	94.5	MRM+PRM	['Meth']
Q3KQJ4	Hspa8	VCNPIITK	liver	—	93.9	MRM+PRM	['Cys']
Q3V117	Acly	AFDSGIIPMEFVNK	BoneMarrow	—	94.2	MRM+PRM	['Meth']
Q62009	Postn	DQGPNVCALQQILGTK	LymphNodes	—	94.0	MRM+PRM	['Cys']
Q7TPR4	Actn1	ICDQWDNLGALTQK	LymphNodes	—	94.2	MRM+PRM	['Cys']
Q8BTM8	Flna	VTYCPTEPGNYIINIK	Thyroid	—	94.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	SmallIntestines	—	94.1	MRM+PRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	LymphNodes	—	93.9	MRM+PRM	['Cys']
Q8VCT3	Rnpep	AFFPCFDTPAVK	Pancreas	—	94.4	MRM+PRM	['Cys']
Q91V92	Acly	AFDSGIIPMEFVNK	BoneMarrow	—	93.5	MRM+PRM	['Meth']
Q91V92	Acly	AFDSGIIPMEFVNK	Muscle	—	93.7	MRM+PRM	['Meth']
Q99LC5	Etfa	TIYAGNALCTVK	Pancreas	—	94.5	MRM+PRM	['Cys']
Q9CVB6	Arpc2	NCFASVFEK	BrainStem	—	93.8	MRM+PRM	['Cys']
Q9ERS2	Ndufa13	ENLEEEAIIMK	Pancreas	—	93.8	MRM+PRM	['Meth']
Q9Z1Q5	Clic1	FLDGNELTLADCNLLPK	SmallIntestines	—	94.2	MRM+PRM	['Cys']
A0A087WSN6	Fn1	WCGTTQNYDADQK	BoneMarrow	—	92.5	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	kidney	—	93.4	MRM+PRM	['Cys']
O55143	Atp2a2	SLPSVETLGCTSVICSDK	BrainStem	—	92.5	MRM+PRM	['Cys']
O55143	Atp2a2	VGEATETALTCLVEK	Heart	—	92.6	MRM+PRM	['Cys']
P11983	Tcp1	IACLDFSLQK	lung	—	93.0	MRM+PRM	['Cys']
P13595	Ncam1	FFLCQVAGDAK	SalivaryGland	—	93.5	MRM+PRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	BoneMarrow	—	92.5	MRM+PRM	['Cys']
P19096	Fasn	DIMLATGK	SmallIntestines	—	93.4	MRM+PRM	['Meth']
P19157	Gstp1	MLLADQGQSWK	Cerebrum	—	92.8	MRM+PRM	['Meth']
P24527	Lta4h	AILPCQDTPSVK	BoneMarrow	—	92.8	MRM+PRM	['Cys']
P26039	Tln1	QELAVFCSPEPPAK	Cerebellum	—	92.9	MRM+PRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	Muscle	—	92.8	MRM+PRM	['Cys']
P60335	Pcbp1	AITIAGVPQSVTECVK	LymphNodes	—	92.9	MRM+PRM	['Cys']
P60766	Cdc42	YVECSALTQK	Spermatozoa	—	92.6	MRM+PRM	['Cys']
P62334	Psmc6	AVASQLDCNFLK	Muscle	—	93.2	MRM+PRM	['Cys']
P62830	Rpl23	ISLGLPVGAVINCADNTGAK	Spermatozoa	—	92.9	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	BrainStem	—	92.6	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	Muscle	—	92.8	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	SalivaryGland	—	93.3	MRM+PRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	TailSkin	—	93.4	MRM+PRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	LymphNodes	—	93.4	MRM+PRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	LymphNodes	—	92.9	MRM+PRM	['Cys']

SysQuan Mouse Database

Cart (0)