SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O70325	Gpx4	ICVNGDDAHPLWK	Cerebrum	—	94.7	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	LymphNodes	—	95.1	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Cerebrum	—	94.8	MRM+PRM	['Cys']
P00329	Adh1	VCLIGCGFSTGYGSAVK	LymphNodes	—	94.6	MRM+PRM	['Cys']
P01027	C3	ACEPGVDYVYK	SmallIntestines	—	94.9	MRM+PRM	['Cys']
P05214	Tuba3a	TIQFVDWCPTGFK	BoneMarrow	—	94.8	MRM+PRM	['Cys']
P05214	Tuba3a	TIQFVDWCPTGFK	BrainStem	—	94.5	MRM+PRM	['Cys']
P08752	Gnai2	LFDSICNNK	SmallIntestines	—	95.2	MRM+PRM	['Cys']
P11983	Tcp1	ICDDELILIK	BrainStem	—	94.8	MRM+PRM	['Cys']
P13595	Ncam1	FFLCQVAGDAK	BrainStem	—	95.4	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	BrainStem	—	95.5	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	Pancreas	—	95.2	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	SmallIntestines	—	95.1	MRM+PRM	['Cys']
P17182	Eno1	SCNCLLLK	BrainStem	—	95.2	MRM+PRM	['Cys']
P17751	Tpi1	VTNGAFTGEISPGMIK	BoneMarrow	—	95.0	MRM+PRM	['Meth']
P17751	Tpi1	VTNGAFTGEISPGMIK	SmallIntestines	—	94.8	MRM+PRM	['Meth']
P19096	Fasn	DIMLATGK	Cerebrum	—	94.5	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	BrainStem	—	95.1	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	Pancreas	—	95.3	MRM+PRM	['Meth']
P28474	Adh5	VCLLGCGISTGYGAAVNTAK	LymphNodes	—	95.1	MRM+PRM	['Cys']
P32921	Wars1	GIFGFTDSDCIGK	LymphNodes	—	95.5	MRM+PRM	['Cys']
P35486	Pdha1	MVNSNLASVEELK	Muscle	—	95.1	MRM+PRM	['Meth']
P46978	Stt3a	VGQAMASTEEK	SmallIntestines	—	94.8	MRM+PRM	['Meth']
P47757	Capzb	GCWDSIHVVEVQEK	SalivaryGland	—	95.0	MRM+PRM	['Cys']
P47791	Gsr	LGGTCVNVGCVPK	BoneMarrow	—	95.1	MRM+PRM	['Cys']
P47791	Gsr	LGGTCVNVGCVPK	Muscle	—	95.3	MRM+PRM	['Cys']
P50516	Atp6v1a	DFPELTMEVDGK	kidney	—	95.0	MRM+PRM	['Meth']
P51881	Slc25a5	GLGDCLVK	BrainStem	—	94.5	MRM+PRM	['Cys']
P53994	Rab2a	SCLLLQFTDK	lung	—	95.1	MRM+PRM	['Cys']
P60335	Pcbp1	AITIAGVPQSVTECVK	BoneMarrow	—	94.9	MRM+PRM	['Cys']
P60335	Pcbp1	AITIAGVPQSVTECVK	BrainStem	—	95.2	MRM+PRM	['Cys']
P60335	Pcbp1	LVVPATQCGSLIGK	Muscle	—	95.0	MRM+PRM	['Cys']
P60764	Rac3	CVVVGDGAVGK	Muscle	—	95.4	MRM+PRM	['Cys']
P60766	Cdc42	CVVVGDGAVGK	Heart	—	95.5	MRM+PRM	['Cys']
P60766	Cdc42	YVECSALTQK	Thyroid	—	95.4	MRM+PRM	['Cys']
P61082	Ube2m	LVICPDEGFYK	SalivaryGland	—	94.7	MRM+PRM	['Cys']
P62259	Ywhae	LICCDILDVLDK	BrainStem	—	95.4	MRM+PRM	['Cys']
P62259	Ywhae	LICCDILDVLDK	Spermatozoa	—	95.3	MRM+PRM	['Cys']
P62334	Psmc6	AVASQLDCNFLK	BoneMarrow	—	95.1	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	BoneMarrow	—	94.5	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	Cerebellum	—	94.8	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	kidney	—	94.6	MRM+PRM	['Cys']
P63017	Hspa8	VCNPIITK	BrainStem	—	95.2	MRM+PRM	['Cys']
P63101	Ywhaz	DICNDVLSLLEK	BrainStem	—	95.0	MRM+PRM	['Cys']
P63101	Ywhaz	DICNDVLSLLEK	SalivaryGland	—	94.6	MRM+PRM	['Cys']
P68040	Rack1	FSPNSSNPIIVSCGWDK	Spleen	—	94.8	MRM+PRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	kidney	—	95.1	MRM+PRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	Thymus	—	94.8	MRM+PRM	['Cys']
P68373	Tuba1c	TIQFVDWCPTGFK	BrainStem	—	94.5	MRM+PRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	BoneMarrow	—	95.3	MRM+PRM	['Cys']

SysQuan Mouse Database

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