SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P54071	Idh2	LIDDMVAQVLK	lung	—	95.7	MRM+PRM	['Meth']
P57722	Pcbp3	LVVPASQCGSLIGK	BrainStem	—	95.5	MRM+PRM	['Cys']
P57722	Pcbp3	LVVPASQCGSLIGK	kidney	—	96.1	MRM+PRM	['Cys']
P57722	Pcbp3	LVVPASQCGSLIGK	LymphNodes	—	95.7	MRM+PRM	['Cys']
P57722	Pcbp3	LVVPASQCGSLIGK	Thyroid	—	96.3	MRM+PRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	SmallIntestines	—	96.2	MRM+PRM	['Cys']
P60335	Pcbp1	AITIAGVPQSVTECVK	Thymus	—	96.0	MRM+PRM	['Cys']
P61082	Ube2m	LVICPDEGFYK	BrainStem	—	96.5	MRM+PRM	['Cys']
P61161	Actr2	VVVCDNGTGFVK	kidney	—	96.4	MRM+PRM	['Cys']
P62830	Rpl23	ISLGLPVGAVINCADNTGAK	Thyroid	—	96.4	MRM+PRM	['Cys']
P62835	Rap1a	QWCNCAFLESSAK	LymphNodes	—	95.9	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	SmallIntestines	—	95.7	MRM+PRM	['Cys']
P62880	Gnb2	TFVSGACDASIK	Thymus	—	95.6	MRM+PRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	SalivaryGland	—	95.8	MRM+PRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	SmallIntestines	—	96.2	MRM+PRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	SalivaryGland	—	95.5	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	Muscle	—	96.2	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	Pancreas	—	96.0	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	Thyroid	—	95.7	MRM+PRM	['Cys']
P68369	Tuba1a	TIQFVDWCPTGFK	LymphNodes	—	96.4	MRM+PRM	['Cys']
P68369	Tuba1a	TIQFVDWCPTGFK	Thymus	—	95.9	MRM+PRM	['Cys']
P68373	Tuba1c	TIQFVDWCPTGFK	BoneMarrow	—	95.7	MRM+PRM	['Cys']
P68373	Tuba1c	TIQFVDWCPTGFK	SalivaryGland	—	95.8	MRM+PRM	['Cys']
P68373	Tuba1c	TIQFVDWCPTGFK	SmallIntestines	—	96.5	MRM+PRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	BoneMarrow	—	96.2	MRM+PRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	Spleen	—	95.6	MRM+PRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	SalivaryGland	—	96.4	MRM+PRM	['Cys']
P99029	Prdx5	GVLFGVPGAFTPGCSK	Thyroid	—	95.7	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	BrainStem	—	96.5	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Spermatozoa	—	96.4	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	BoneMarrow	—	95.9	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	LymphNodes	—	96.1	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Spermatozoa	—	95.6	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	BoneMarrow	—	96.1	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	SmallIntestines	—	96.3	MRM+PRM	['Cys']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	LymphNodes	—	96.1	MRM+PRM	['Meth']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	Pancreas	—	96.2	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	BoneMarrow	—	96.5	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	LymphNodes	—	95.6	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	Spermatozoa	—	95.8	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	SmallIntestines	—	96.5	MRM+PRM	['Meth']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Thymus	—	96.3	MRM+PRM	['Cys']
Q3UL78	Cdc42	YVECSALTQK	SalivaryGland	—	96.1	MRM+PRM	['Cys']
Q3UL78	Cdc42	YVECSALTQK	SmallIntestines	—	96.5	MRM+PRM	['Cys']
Q3V117	Acly	AFDSGIIPMEFVNK	SalivaryGland	—	96.5	MRM+PRM	['Meth']
Q5SV64	Myh10	EDQSILCTGESGAGK	Cerebrum	—	96.2	MRM+PRM	['Cys']
Q60864	Stip1	DCEECIQLEPTFIK	Pancreas	—	96.3	MRM+PRM	['Cys']
Q61147	Cp	DIFTGLIGPMK	SalivaryGland	—	95.6	MRM+PRM	['Meth']
Q61207	Psap	GCSFLPDPYQK	BrainStem	—	96.5	MRM+PRM	['Cys']
Q61990	Pcbp2	LVVPASQCGSLIGK	BrainStem	—	95.5	MRM+PRM	['Cys']

SysQuan Mouse Database

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