SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P62835	Rap1a	QWCNCAFLESSAK	SmallIntestines	—	97.2	MRM+PRM	['Cys']
P62835	Rap1a	QWCNCAFLESSAK	Thymus	—	97.4	MRM+PRM	['Cys']
P62835	Rap1a	QWCNCAFLESSAK	Thyroid	—	96.8	MRM+PRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	BoneMarrow	—	97.3	MRM+PRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	LymphNodes	—	97.4	MRM+PRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	SalivaryGland	—	97.1	MRM+PRM	['Cys']
P63028	Tpt1	EIADGLCLEVEGK	Thyroid	—	96.8	MRM+PRM	['Cys']
P63101	Ywhaz	DICNDVLSLLEK	SmallIntestines	—	97.5	MRM+PRM	['Cys']
P63101	Ywhaz	DICNDVLSLLEK	Thymus	—	96.9	MRM+PRM	['Cys']
P68040	Rack1	YWLCAATGPSIK	Thyroid	—	96.7	MRM+PRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	LymphNodes	—	97.0	MRM+PRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	Pancreas	—	96.8	MRM+PRM	['Cys']
P68368	Tuba4a	SIQFVDWCPTGFK	Thyroid	—	96.6	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	BoneMarrow	—	97.1	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	BrainStem	—	96.8	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	SalivaryGland	—	97.2	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	SmallIntestines	—	97.1	MRM+PRM	['Cys']
P68368	Tuba4a	TIGGGDDSFTTFFCETGAGK	Thymus	—	97.1	MRM+PRM	['Cys']
P68373	Tuba1c	TIQFVDWCPTGFK	TailSkin	—	97.4	MRM+PRM	['Cys']
P68510	Ywhah	NCNDFQYESK	BrainStem	—	97.1	MRM+PRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	Muscle	—	96.6	MRM+PRM	['Cys']
P80313	Cct7	QLCDNAGFDATNILNK	Spermatozoa	—	96.8	MRM+PRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	SalivaryGland	—	97.3	MRM+PRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	SmallIntestines	—	96.8	MRM+PRM	['Cys']
P84084	Arf5	NICFTVWDVGGQDK	Thymus	—	96.9	MRM+PRM	['Cys']
P97315	Csrp1	TVYFAEEVQCEGNSFHK	BoneMarrow	—	97.2	MRM+PRM	['Cys']
P97447	Fhl1	FTAVEDQYYCVDCYK	LymphNodes	—	97.3	MRM+PRM	['Cys']
P97447	Fhl1	FTAVEDQYYCVDCYK	SalivaryGland	—	97.1	MRM+PRM	['Cys']
P97447	Fhl1	FTAVEDQYYCVDCYK	SmallIntestines	—	97.4	MRM+PRM	['Cys']
P97457	Myl11	NICYVITHGDAK	BoneMarrow	—	96.9	MRM+PRM	['Cys']
P97807	Fh	LMNESLMLVTALNPHIGYDK	Cerebrum	—	97.1	MRM+PRM	['Meth']
P97807	Fh	LMNESLMLVTALNPHIGYDK	Pancreas	—	97.2	MRM+PRM	['Meth']
P99029	Prdx5	GVLFGVPGAFTPGCSK	LymphNodes	—	96.7	MRM+PRM	['Cys']
Q00612	G6pdx	GPTEADELMK	Spleen	—	97.3	MRM+PRM	['Meth']
Q01279	Egfr	YSFGATCVK	Cerebrum	—	97.2	MRM+PRM	['Cys']
Q01853	Vcp	AIANECQANFISIK	lung	—	97.2	MRM+PRM	['Cys']
Q01853	Vcp	AIANECQANFISIK	Pancreas	—	97.0	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Cerebrum	—	97.2	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Pancreas	—	97.2	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	SalivaryGland	—	97.1	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Thymus	—	96.9	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Thyroid	—	97.4	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Pancreas	—	97.1	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Thymus	—	97.1	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Thyroid	—	96.9	MRM+PRM	['Cys']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	Thymus	—	97.2	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	Cerebrum	—	97.3	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	LymphNodes	—	97.2	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	Muscle	—	97.4	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	SalivaryGland	—	97.2	MRM+PRM	['Meth']

SysQuan Mouse Database

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