SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O08553	Dpysl2	GLYDGPVCEVSVTPK	Spleen	—	96.7	MRM+PRM	['Cys']
O08749	Dld	ALLNNSHYYHMAHGK	SalivaryGland	—	96.7	MRM+PRM	['Meth']
O55131	Septin7	ADTLTPEECQQFK	SalivaryGland	—	96.8	MRM+PRM	['Cys']
O55143	Atp2a2	SLPSVETLGCTSVICSDK	Thymus	—	96.6	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	Heart	—	96.7	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	kidney	—	97.1	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Muscle	—	97.4	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Pancreas	—	96.5	MRM+PRM	['Cys']
O88876	Dhrs3	SLMDSDDDALLK	kidney	—	97.3	MRM+PRM	['Meth']
O88958	Gnpda1	TVFVCDEDATLELK	kidney	—	96.9	MRM+PRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	Spleen	—	97.1	MRM+PRM	['Cys']
O88990	Actn3	CQLEINFNTLQTK	BoneMarrow	—	96.8	MRM+PRM	['Cys']
O88990	Actn3	CQLEINFNTLQTK	Muscle	—	97.0	MRM+PRM	['Cys']
O88990	Actn3	CQLEINFNTLQTK	Thyroid	—	97.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	SalivaryGland	—	97.4	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	SmallIntestines	—	97.2	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	Thyroid	—	97.4	MRM+PRM	['Cys']
P00329	Adh1	VCLIGCGFSTGYGSAVK	SalivaryGland	—	96.5	MRM+PRM	['Cys']
P00329	Adh1	VCLIGCGFSTGYGSAVK	SmallIntestines	—	96.8	MRM+PRM	['Cys']
P01027	C3	ADIGCTPGSGK	Heart	—	96.9	MRM+PRM	['Cys']
P05214	Tuba3a	TIQFVDWCPTGFK	Cerebrum	—	97.0	MRM+PRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	BrainStem	—	96.8	MRM+PRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	Muscle	—	97.4	MRM+PRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	Spermatozoa	—	97.3	MRM+PRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	Thyroid	—	96.9	MRM+PRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	LymphNodes	—	97.2	MRM+PRM	['Cys']
P08752	Gnai2	LFDSICNNK	kidney	—	97.2	MRM+PRM	['Cys']
P09411	Pgk1	AHSSMVGVNLPQK	Pancreas	—	96.8	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	Thyroid	—	97.0	MRM+PRM	['Meth']
P09411	Pgk1	FCLDNGAK	Muscle	—	97.4	MRM+PRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	Pancreas	—	96.6	MRM+PRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	Thyroid	—	97.5	MRM+PRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	Cerebrum	—	97.2	MRM+PRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	Muscle	—	96.6	MRM+PRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	SmallIntestines	—	96.7	MRM+PRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	Thymus	—	97.3	MRM+PRM	['Cys']
P13707	Gpd1	VCIVGSGNWGSAIAK	Thyroid	—	96.7	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Spermatozoa	—	97.0	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	Cerebrum	—	97.4	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	BoneMarrow	—	97.5	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	SmallIntestines	—	97.4	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	LymphNodes	—	97.5	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	Spermatozoa	—	97.4	MRM+PRM	['Cys']
P16015	Ca3	EPMTVSSDQMAK	Pancreas	—	96.9	MRM+PRM	['Meth']
P16460	Ass1	NDLMEYAK	BrainStem	—	96.6	MRM+PRM	['Meth']
P16460	Ass1	NDLMEYAK	Cerebrum	—	96.7	MRM+PRM	['Meth']
P17182	Eno1	SCNCLLLK	plasma	—	97.3	MRM+PRM	['Cys']
P17751	Tpi1	VTNGAFTGEISPGMIK	Spermatozoa	—	96.7	MRM+PRM	['Meth']
P19096	Fasn	DIMLATGK	BrainStem	—	97.1	MRM+PRM	['Meth']
P19096	Fasn	DIMLATGK	Thymus	—	97.3	MRM+PRM	['Meth']

SysQuan Mouse Database

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