SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q3V117	Acly	AFDSGIIPMEFVNK	Thymus	—	97.8	MRM+PRM	['Meth']
Q5EBQ0	Vdac3	CNTPTYCDLGK	Cerebellum	—	98.0	MRM+PRM	['Cys']
Q5EBQ0	Vdac3	CNTPTYCDLGK	Cerebrum	—	97.6	MRM+PRM	['Cys']
Q5EBQ0	Vdac3	CNTPTYCDLGK	Muscle	—	98.1	MRM+PRM	['Cys']
Q5EBQ0	Vdac3	CNTPTYCDLGK	Thyroid	—	97.7	MRM+PRM	['Cys']
Q60790	Rasa3	LSEVITDTGVVCHK	Spleen	—	98.0	MRM+PRM	['Cys']
Q60864	Stip1	DCEECIQLEPTFIK	kidney	—	98.1	MRM+PRM	['Cys']
Q60864	Stip1	DCEECIQLEPTFIK	lung	—	98.4	MRM+PRM	['Cys']
Q60930	Vdac2	WCEYGLTFTEK	lung	—	98.4	MRM+PRM	['Cys']
Q60930	Vdac2	WCEYGLTFTEK	LymphNodes	—	97.6	MRM+PRM	['Cys']
Q60930	Vdac2	WCEYGLTFTEK	SalivaryGland	—	97.7	MRM+PRM	['Cys']
Q60930	Vdac2	WCEYGLTFTEK	SmallIntestines	—	97.5	MRM+PRM	['Cys']
Q60930	Vdac2	WCEYGLTFTEK	Thyroid	—	97.7	MRM+PRM	['Cys']
Q60931	Vdac3	CNTPTYCDLGK	Cerebellum	—	98.0	MRM+PRM	['Cys']
Q60931	Vdac3	CNTPTYCDLGK	Spermatozoa	—	97.8	MRM+PRM	['Cys']
Q61699	Hsph1	GCALQCAILSPAFK	lung	—	98.2	MRM+PRM	['Cys']
Q61739	Itga6	FGSCQQGVAATFTK	kidney	—	97.6	MRM+PRM	['Cys']
Q61990	Pcbp2	LVVPASQCGSLIGK	liver	—	97.8	MRM+PRM	['Cys']
Q61990	Pcbp2	LVVPASQCGSLIGK	SalivaryGland	—	98.3	MRM+PRM	['Cys']
Q61990	Pcbp2	LVVPASQCGSLIGK	SmallIntestines	—	98.2	MRM+PRM	['Cys']
Q61990	Pcbp2	LVVPASQCGSLIGK	Thymus	—	97.7	MRM+PRM	['Cys']
Q64518	Atp2a3	SLPSVETLGCTSVICSDK	Spleen	—	98.0	MRM+PRM	['Cys']
Q64727	Vcl	VGELCAGK	liver	—	98.0	MRM+PRM	['Cys']
Q68FD5	Cltc	LECSEELGDLVK	Spleen	—	97.8	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Cerebellum	—	97.9	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	LymphNodes	—	98.0	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Muscle	—	98.3	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Pancreas	—	97.6	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	SalivaryGland	—	97.6	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Thymus	—	98.4	MRM+PRM	['Cys']
Q68FD5	Cltc	VIQCFAETGQVQK	Thyroid	—	97.7	MRM+PRM	['Cys']
Q6P6M7	Sepsecs	MQDVDLFIK	kidney	—	97.8	MRM+PRM	['Meth']
Q6ZPJ3	Ube2o	LIGTNCIIYPVNSK	Cerebellum	—	98.3	MRM+PRM	['Cys']
Q7TPR4	Actn1	ICDQWDNLGALTQK	BrainStem	—	98.1	MRM+PRM	['Cys']
Q7TPR4	Actn1	ICDQWDNLGALTQK	Cerebellum	—	97.9	MRM+PRM	['Cys']
Q80XI4	Pip4k2b	FFGPGEFDPSVDVYAMK	BrainStem	—	97.7	MRM+PRM	['Meth']
Q80XI4	Pip4k2b	FFGPGEFDPSVDVYAMK	Cerebrum	—	97.6	MRM+PRM	['Meth']
Q80ZI9	Wdr1	GPVTDVAYSHDGAFLAVCDASK	kidney	—	98.0	MRM+PRM	['Cys']
Q80ZI9	Wdr1	LATGSDDNCAAFFEGPPFK	kidney	—	98.3	MRM+PRM	['Cys']
Q8BH00	Aldh8a1	ELNLPFGGMK	kidney	—	98.3	MRM+PRM	['Meth']
Q8BH86	Dglucy	IPGISSTGVGDGGNELGMGK	Heart	—	97.8	MRM+PRM	['Meth']
Q8BH95	Echs1	EGMTAFVEK	Heart	—	97.7	MRM+PRM	['Meth']
Q8BH95	Echs1	EGMTAFVEK	kidney	—	97.7	MRM+PRM	['Meth']
Q8BH95	Echs1	IVVAMAK	LymphNodes	—	98.1	MRM+PRM	['Meth']
Q8BH95	Echs1	IVVAMAK	SalivaryGland	—	98.0	MRM+PRM	['Meth']
Q8BH95	Echs1	IVVAMAK	Thymus	—	98.4	MRM+PRM	['Meth']
Q8BTM8	Flna	EEPCLLK	kidney	—	98.0	MRM+PRM	['Cys']
Q8BTM8	Flna	EEPCLLK	lung	—	98.5	MRM+PRM	['Cys']
Q8BTM8	Flna	VTYCPTEPGNYIINIK	BrainStem	—	97.6	MRM+PRM	['Cys']
Q8BTM8	Flna	VTYCPTEPGNYIINIK	Cerebrum	—	98.1	MRM+PRM	['Cys']

SysQuan Mouse Database

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