SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P97807	Fh	LMNESLMLVTALNPHIGYDK	SalivaryGland	—	98.1	MRM+PRM	['Meth']
P97807	Fh	LMNESLMLVTALNPHIGYDK	Thymus	—	97.7	MRM+PRM	['Meth']
P97807	Fh	LMNESLMLVTALNPHIGYDK	Thyroid	—	98.4	MRM+PRM	['Meth']
P99029	Prdx5	GVLFGVPGAFTPGCSK	Cerebellum	—	98.0	MRM+PRM	['Cys']
Q01279	Egfr	NLCYANTINWK	plasma	—	98.1	MRM+PRM	['Cys']
Q01853	Vcp	AIANECQANFISIK	Cerebrum	—	97.7	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	BoneMarrow	—	97.8	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	kidney	—	97.9	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Muscle	—	98.2	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Pancreas	—	98.1	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	SmallIntestines	—	98.0	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Spleen	—	97.9	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Thymus	—	97.8	MRM+PRM	['Cys']
Q01853	Vcp	GVLFYGPPGCGK	Thyroid	—	98.4	MRM+PRM	['Cys']
Q01853	Vcp	LGDVISIQPCPDVK	Muscle	—	97.7	MRM+PRM	['Cys']
Q02053	Uba1	SIPICTLK	BrainStem	—	98.0	MRM+PRM	['Cys']
Q02053	Uba1	SIPICTLK	kidney	—	98.3	MRM+PRM	['Cys']
Q02053	Uba1	SIPICTLK	lung	—	98.5	MRM+PRM	['Cys']
Q02053	Uba1	SIPICTLK	Pancreas	—	98.3	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Cerebellum	—	98.0	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	LymphNodes	—	98.0	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Muscle	—	97.9	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	SalivaryGland	—	98.0	MRM+PRM	['Cys']
Q02053	Uba1	YFLVGAGAIGCELLK	Spermatozoa	—	97.8	MRM+PRM	['Cys']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	BoneMarrow	—	98.2	MRM+PRM	['Meth']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	Cerebellum	—	98.2	MRM+PRM	['Meth']
Q03265	Atp5f1a	NVQAEEMVEFSSGLK	Thyroid	—	97.8	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	Cerebellum	—	98.2	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	Cerebrum	—	97.8	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	Heart	—	98.4	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	kidney	—	97.9	MRM+PRM	['Meth']
Q04447	Ckb	LEQGQAIDDLMPAQK	Thymus	—	98.4	MRM+PRM	['Meth']
Q04447	Ckb	LGFSEVELVQMVVDGVK	BoneMarrow	—	97.6	MRM+PRM	['Meth']
Q04447	Ckb	LGFSEVELVQMVVDGVK	SmallIntestines	—	98.4	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	Heart	—	98.0	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	kidney	—	97.9	MRM+PRM	['Meth']
Q05920	Pc	AYVEANQMLGDLIK	Pancreas	—	97.8	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	Heart	—	97.5	MRM+PRM	['Meth']
Q07417	Acads	GISAFLVPMPTPGLTLGK	kidney	—	97.7	MRM+PRM	['Meth']
Q3TRH3	Hspa8	VCNPIITK	SmallIntestines	—	98.3	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	kidney	—	97.9	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	SalivaryGland	—	98.2	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Cerebellum	—	98.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	kidney	—	97.8	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Pancreas	—	98.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	SmallIntestines	—	97.8	MRM+PRM	['Cys']
Q3UDC8	Eef2	DLEEDHACIPIK	liver	—	97.9	MRM+PRM	['Cys']
Q3UQ71	Ephx2	EMVTFLDK	Heart	—	98.1	MRM+PRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	Spermatozoa	—	98.3	MRM+PRM	['Meth']
Q3V117	Acly	AFDSGIIPMEFVNK	lung	—	98.5	MRM+PRM	['Meth']

SysQuan Mouse Database

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