SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q9Z2M7	Pmm2	IGVVGGSDFEK	Cerebrum	—	100.0	0	MRM	—
Q9Z2U1	Psma5	AIGSASEGAQSSLQEVYHK	BrainStem	—	100.0	0	MRM	—
Q9Z2U1	Psma5	AIGSASEGAQSSLQEVYHK	Cerebellum	—	100.0	0	MRM	—
Q9Z2U1	Psma5	AIGSASEGAQSSLQEVYHK	Cerebrum	—	100.0	0	MRM	—
Q9Z2X1	Hnrnpf	ITGEAFVQFASQELAEK	BrainStem	—	100.0	0	MRM	—
Q9Z2X1	Hnrnpf	ITGEAFVQFASQELAEK	Cerebellum	—	100.0	0	MRM	—
Q9Z2X1	Hnrnpf	ITGEAFVQFASQELAEK	Cerebrum	—	100.0	0	MRM	—
Q9Z2Z6	Slc25a20	FQTAPPGK	Cerebrum	—	100.0	0	MRM	—
V9GXM1	Arfgap1	DVTTFFSGK	BrainStem	—	100.0	0	MRM	—
V9GXM1	Arfgap1	DVTTFFSGK	Cerebellum	—	100.0	0	MRM	—
V9GXM1	Arfgap1	DVTTFFSGK	Cerebrum	—	100.0	0	MRM	—
P09405	Ncl	KFGYVDFESAEDLEK	BrainStem	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	BrainStem	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Cerebellum	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	Cerebrum	—	100.0	1	MRM	—
P09411	Pgk1	WNTEDKVSHVSTGGGASLELLEGK	MockWholeBrain	—	100.0	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	BrainStem	—	100.0	1	MRM	—
P24549	Aldh1a1	RVTLELGGK	Cerebrum	—	100.0	1	MRM	—
P41216	Acsl1	TAEALDKDGWLHTGDIGK	BrainStem	—	100.0	1	MRM	—
P41216	Acsl1	TAEALDKDGWLHTGDIGK	Cerebrum	—	100.0	1	MRM	—
P41216	Acsl1	TAEALDKDGWLHTGDIGK	MockWholeBrain	—	100.0	1	MRM	—
Q3THL7	Vdac1	LTFDSSFSPNTGKK	BrainStem	—	100.0	1	MRM	—
Q3THL7	Vdac1	LTFDSSFSPNTGKK	Cerebrum	—	100.0	1	MRM	—
Q3THL7	Vdac1	LTFDSSFSPNTGKK	MockWholeBrain	—	100.0	1	MRM	—
Q3U6K8	Vdac1	LTFDSSFSPNTGKK	BrainStem	—	100.0	1	MRM	—
Q3U6K8	Vdac1	LTFDSSFSPNTGKK	Cerebellum	—	100.0	1	MRM	—
Q3U6K8	Vdac1	LTFDSSFSPNTGKK	Cerebrum	—	100.0	1	MRM	—
Q91Z53	Grhpr	RLPEAIEEVK	BrainStem	—	100.0	1	MRM	—
Q9CZS1	Aldh1b1	RVTLELGGK	BrainStem	—	100.0	1	MRM	—
Q9JLZ3	Auh	DRLEGLLAFK	BrainStem	—	100.0	1	MRM	—
Q9JLZ3	Auh	DRLEGLLAFK	Cerebellum	—	100.0	1	MRM	—
Q922B2	Dars1	NNAYLAQSPQLYK	MockWholeBrain	—	99.8	0	MRM	—
Q8BVE3	Atp6v1h	YNALLAVQK	MockWholeBrain	—	99.8	0	MRM	—
Q9D1A2	Cndp2	YPSLSLHGIEGAFSGSGAK	Cerebellum	—	99.7	0	MRM	—
Q3V117	Acly	EAYPEEAYIADLDAK	Cerebellum	—	99.6	0	MRM	—
Q3TYE5	Lsamp	VTVNYPPTITESK	Cerebrum	—	99.5	0	MRM	—
Q8BLK3	Lsamp	VTVNYPPTITESK	Cerebrum	—	99.5	0	MRM	—
O70435	Psma3	IIYIVHDEVK	MockWholeBrain	—	99.4	0	MRM	—
O08638	Myh11	YEILAANAIPK	BrainStem	—	99.3	0	MRM	—
P08249	Mdh2	HGVYNPNK	Cerebellum	—	99.3	0	MRM	—
P30416	Fkbp4	GEHSIVYLKPSYAFGSVGK	Cerebrum	—	99.3	0	MRM	—
P08249	Mdh2	HGVYNPNK	MockWholeBrain	—	99.3	0	MRM	—
P46471	Psmc2	ESDTGLAPPALWDLAADK	Cerebellum	—	99.2	0	MRM	—
Q922H4	Gmppa	IPAEVLILNSIVLPHK	BrainStem	—	99.2	0	MRM	—
P97494	Gclc	YDSIDSYLSK	Cerebellum	—	99.1	0	MRM	—
Q6ZQ38	Cand1	AADIDQEVK	Cerebrum	—	99.1	0	MRM	—
Q3V117	Acly	LTLLNPK	Cerebellum	—	99.1	0	MRM	—
P50429	Arsb	LLPQLLK	MockWholeBrain	—	99.0	0	MRM	—
P10126	Eef1a1	QLIVGVNK	Cerebrum	—	99.0	0	MRM	—
Q9QZ88	Vps29	GDFDENLNYPEQK	Cerebellum	—	99.0	0	MRM	—

SysQuan Mouse Database

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