SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P01027	C3	ACEPGVDYVYK	plasma	—	97.9	MRM+PRM	['Cys']
P01027	C3	ADIGCTPGSGK	kidney	—	98.3	MRM+PRM	['Cys']
P05213	Tuba1b	SIQFVDWCPTGFK	Heart	—	97.8	MRM+PRM	['Cys']
P05213	Tuba1b	SIQFVDWCPTGFK	SalivaryGland	—	97.7	MRM+PRM	['Cys']
P05214	Tuba3a	TIQFVDWCPTGFK	Spermatozoa	—	98.3	MRM+PRM	['Cys']
P06801	Me1	DMAAFNERPIIFALSNPTSK	BrainStem	—	98.0	MRM+PRM	['Meth']
P08121	Col3a1	FTYTVLEDGCTK	lung	—	97.5	MRM+PRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	LymphNodes	—	97.8	MRM+PRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	Pancreas	—	98.2	MRM+PRM	['Cys']
P08249	Mdh2	TIIPLISQCTPK	SalivaryGland	—	98.1	MRM+PRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	BoneMarrow	—	98.0	MRM+PRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	Heart	—	97.8	MRM+PRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	kidney	—	98.0	MRM+PRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	SalivaryGland	—	98.0	MRM+PRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	Spleen	—	97.9	MRM+PRM	['Cys']
P08752	Gnai2	LFDSICNNK	Heart	—	98.4	MRM+PRM	['Cys']
P09411	Pgk1	AHSSMVGVNLPQK	BoneMarrow	—	97.6	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	LymphNodes	—	97.7	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	SalivaryGland	—	97.7	MRM+PRM	['Meth']
P09411	Pgk1	AHSSMVGVNLPQK	Thymus	—	97.7	MRM+PRM	['Meth']
P09411	Pgk1	FCLDNGAK	BoneMarrow	—	97.7	MRM+PRM	['Cys']
P09411	Pgk1	FCLDNGAK	BrainStem	—	97.6	MRM+PRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	Muscle	—	97.7	MRM+PRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	SmallIntestines	—	97.9	MRM+PRM	['Cys']
P11725	Otc	FGMHLQAATPK	SmallIntestines	—	98.1	MRM+PRM	['Meth']
P11983	Tcp1	IACLDFSLQK	SalivaryGland	—	97.6	MRM+PRM	['Cys']
P11983	Tcp1	IACLDFSLQK	Thymus	—	98.0	MRM+PRM	['Cys']
P11983	Tcp1	ICDDELILIK	lung	—	98.3	MRM+PRM	['Cys']
P11983	Tcp1	ICDDELILIK	Spleen	—	97.8	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	BoneMarrow	—	97.9	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Cerebellum	—	98.1	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	LymphNodes	—	98.2	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Pancreas	—	98.2	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	SalivaryGland	—	98.2	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	SmallIntestines	—	98.1	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Thymus	—	98.2	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Thyroid	—	97.9	MRM+PRM	['Cys']
P14206	Rpsa	YVDIAIPCNNK	Heart	—	98.1	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	kidney	—	98.2	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	LymphNodes	—	97.7	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	Pancreas	—	98.2	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	SalivaryGland	—	98.2	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	Spermatozoa	—	97.8	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	Thymus	—	97.8	MRM+PRM	['Cys']
P14211	Calr	HEQNIDCGGGYVK	Thyroid	—	97.7	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	BoneMarrow	—	97.7	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	Pancreas	—	98.2	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	SalivaryGland	—	98.0	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	Thymus	—	98.2	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	Thyroid	—	97.8	MRM+PRM	['Cys']

SysQuan Mouse Database

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