SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Thymus	—	99.1	MRM+PRM	['Cys']
O88844	Idh1	SIEDFAHSSFQMALSK	Muscle	—	98.7	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	lung	—	98.6	MRM+PRM	['Meth']
O88958	Gnpda1	TVFVCDEDATLELK	lung	—	99.1	MRM+PRM	['Cys']
P01027	C3	ADIGCTPGSGK	plasma	—	98.6	MRM+PRM	['Cys']
P05214	Tuba3a	TIQFVDWCPTGFK	TailSkin	—	98.8	MRM+PRM	['Cys']
P06801	Me1	AECSAEQCYK	LymphNodes	—	99.2	MRM+PRM	['Cys']
P08752	Gnai2	EIYTHFTCATDTK	Thymus	—	98.9	MRM+PRM	['Cys']
P09411	Pgk1	GCITIIGGGDTATCCAK	Thymus	—	99.2	MRM+PRM	['Cys']
P11152	Lpl	CNNLGYEINK	Heart	—	98.5	MRM+PRM	['Cys']
P11680	Cfp	LCTPLLPK	plasma	—	98.5	MRM+PRM	['Cys']
P13595	Ncam1	FFLCQVAGDAK	kidney	—	98.5	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Muscle	—	98.5	MRM+PRM	['Cys']
P14152	Mdh1	VIVVGNPANTNCLTASK	Spleen	—	98.5	MRM+PRM	['Cys']
P14869	Rplp0	AGAIAPCEVTVPAQNTGLGPEK	Muscle	—	98.7	MRM+PRM	['Cys']
P15327	Bpgm	FCSWVDQK	Cerebrum	—	98.5	MRM+PRM	['Cys']
P15327	Bpgm	FCSWVDQK	lung	—	98.7	MRM+PRM	['Cys']
P15327	Bpgm	FCSWVDQK	plasma	—	99.4	MRM+PRM	['Cys']
P16015	Ca3	EPMTVSSDQMAK	Thyroid	—	98.6	MRM+PRM	['Meth']
P16460	Ass1	NDLMEYAK	kidney	—	99.0	MRM+PRM	['Meth']
P17182	Eno1	SCNCLLLK	kidney	—	99.0	MRM+PRM	['Cys']
P17182	Eno1	SCNCLLLK	lung	—	98.9	MRM+PRM	['Cys']
P17182	Eno1	SCNCLLLK	LymphNodes	—	98.5	MRM+PRM	['Cys']
P17182	Eno1	SCNCLLLK	Thymus	—	98.6	MRM+PRM	['Cys']
P18760	Cfl1	AVLFCLSEDK	lung	—	98.8	MRM+PRM	['Cys']
P19157	Gstp1	MLLADQGQSWK	Pancreas	—	98.5	MRM+PRM	['Meth']
P20918	Plg	WEYCNLK	kidney	—	98.7	MRM+PRM	['Cys']
P20918	Plg	WEYCNLK	lung	—	98.6	MRM+PRM	['Cys']
P20918	Plg	WEYCNLK	plasma	—	98.6	MRM+PRM	['Cys']
P26039	Tln1	QELAVFCSPEPPAK	liver	—	98.7	MRM+PRM	['Cys']
P26443	Glud1	ALASLMTYK	BoneMarrow	—	98.6	MRM+PRM	['Meth']
P26443	Glud1	ALASLMTYK	lung	—	98.7	MRM+PRM	['Meth']
P40124	Cap1	TDGCHAYLSK	Cerebrum	—	98.7	MRM+PRM	['Cys']
P40124	Cap1	TDGCHAYLSK	Spleen	—	99.2	MRM+PRM	['Cys']
P42932	Cct8	QITSYGETCPGLEQYAIK	Thymus	—	98.7	MRM+PRM	['Cys']
P47757	Capzb	GCWDSIHVVEVQEK	Pancreas	—	98.9	MRM+PRM	['Cys']
P47856	Gfpt1	AVQTLQMELQQIMK	Pancreas	—	99.3	MRM+PRM	['Meth']
P50247	Ahcy	DGPLNMILDDGGDLTNLIHTK	Heart	—	99.1	MRM+PRM	['Meth']
P51881	Slc25a5	GLGDCLVK	Heart	—	98.8	MRM+PRM	['Cys']
P53994	Rab2a	SCLLLQFTDK	Pancreas	—	98.8	MRM+PRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	Cerebellum	—	98.7	MRM+PRM	['Cys']
P58252	Eef2	DLEEDHACIPIK	Heart	—	98.7	MRM+PRM	['Cys']
P58774	Tpm2	CGDLEEELK	Muscle	—	98.7	MRM+PRM	['Cys']
P60335	Pcbp1	LVVPATQCGSLIGK	Cerebellum	—	98.6	MRM+PRM	['Cys']
P60335	Pcbp1	LVVPATQCGSLIGK	Thyroid	—	99.0	MRM+PRM	['Cys']
P61164	Actr1a	ACYLSINPQK	BrainStem	—	99.1	MRM+PRM	['Cys']
P62830	Rpl23	ISLGLPVGAVINCADNTGAK	Pancreas	—	98.8	MRM+PRM	['Cys']
P63017	Hspa8	VCNPIITK	Pancreas	—	98.7	MRM+PRM	['Cys']
P63017	Hspa8	VCNPIITK	Thymus	—	98.6	MRM+PRM	['Cys']
P68040	Rack1	FSPNSSNPIIVSCGWDK	BoneMarrow	—	98.6	MRM+PRM	['Cys']

SysQuan Mouse Database

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