SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9WUR9	Ak4	PVIELYK	MockWholeBrain	—	100.0	MRM	—
Q9WUU7	Ctsz	IVTSTYK	BrainStem	—	100.0	MRM	—
Q9WUU7	Ctsz	IVTSTYK	Cerebellum	—	100.0	MRM	—
Q9WUU7	Ctsz	IVTSTYK	Cerebrum	—	100.0	MRM	—
Q9WVH9	Fbln5	YPGAYYIFQIK	Cerebellum	—	100.0	MRM	—
Q9WVK4	Ehd1	ELVNNLGEIYQK	Cerebellum	—	100.0	MRM	—
Q9WVK4	Ehd1	LDISDEFSEVIK	Cerebellum	—	100.0	MRM	—
Q9WVK4	Ehd1	LDISDEFSEVIK	MockWholeBrain	—	100.0	MRM	—
Q9Z0S1	Bpnt1	IIQLIEGK	BrainStem	—	100.0	MRM	—
Q9Z0X1	Aifm1	ELWFSDDPNVTK	BrainStem	—	100.0	MRM	—
Q9Z0X1	Aifm1	ELWFSDDPNVTK	Cerebellum	—	100.0	MRM	—
Q9Z0X1	Aifm1	ELWFSDDPNVTK	MockWholeBrain	—	100.0	MRM	—
Q9Z1E4	Gys1	TNNFNVETLK	Cerebellum	—	100.0	MRM	—
Q9Z1E4	Gys1	TNNFNVETLK	Cerebrum	—	100.0	MRM	—
Q9Z1E4	Gys1	TNNFNVETLK	MockWholeBrain	—	100.0	MRM	—
Q9Z1G3	Atp6v1c1	EVLHELYK	Cerebellum	—	100.0	MRM	—
Q9Z1G3	Atp6v1c1	EVLHELYK	MockWholeBrain	—	100.0	MRM	—
Q9Z1G4	Atp6v0a1	NFLELTELK	BrainStem	—	100.0	MRM	—
Q9Z1Q2	Abhd16a	GNDLLLK	BrainStem	—	100.0	MRM	—
Q9Z1Q5	Clic1	GVTFNVTTVDTK	BrainStem	—	100.0	MRM	—
Q9Z1Q5	Clic1	GVTFNVTTVDTK	Cerebellum	—	100.0	MRM	—
Q9Z1Q5	Clic1	GVTFNVTTVDTK	Cerebrum	—	100.0	MRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	BrainStem	—	100.0	MRM	—
Q9Z1Q5	Clic1	NSNPALNDNLEK	Cerebrum	—	100.0	MRM	—
Q9Z1T2	Thbs4	KPQDFLEELK	Cerebrum	—	100.0	MRM	—
Q9Z1T6	Pikfyve	LQDLFQQEK	Cerebrum	—	100.0	MRM	—
Q9Z1T6	Pikfyve	LQDLFQQEK	MockWholeBrain	—	100.0	MRM	—
Q9Z204	Hnrnpc	SDVEAIFSK	BrainStem	—	100.0	MRM	—
Q9Z204	Hnrnpc	SDVEAIFSK	Cerebellum	—	100.0	MRM	—
Q9Z204	Hnrnpc	SDVEAIFSK	Cerebrum	—	100.0	MRM	—
Q9Z2I8	Suclg2	EQIDIFEGIK	BrainStem	—	100.0	MRM	—
Q9Z2I8	Suclg2	EQIDIFEGIK	Cerebrum	—	100.0	MRM	—
Q9Z2I8	Suclg2	GVFNSGLK	BrainStem	—	100.0	MRM	—
Q9Z2I8	Suclg2	PANFLDLGGGVK	BrainStem	—	100.0	MRM	—
Q9Z2I8	Suclg2	PANFLDLGGGVK	Cerebellum	—	100.0	MRM	—
Q9Z2I8	Suclg2	PANFLDLGGGVK	Cerebrum	—	100.0	MRM	—
Q9Z2I9	Sucla2	ALIADSGLK	Cerebrum	—	100.0	MRM	—
Q9Z2I9	Sucla2	IVFSPEEAK	BrainStem	—	100.0	MRM	—
Q9Z2I9	Sucla2	IVFSPEEAK	Cerebrum	—	100.0	MRM	—
Q9Z2I9	Sucla2	LSEIVTLAK	BrainStem	—	100.0	MRM	—
Q9Z2I9	Sucla2	LSEIVTLAK	Cerebrum	—	100.0	MRM	—
Q9Z2I9	Sucla2	LSEIVTLAK	MockWholeBrain	—	100.0	MRM	—
Q9Z2I9	Sucla2	LYNLFLK	BrainStem	—	100.0	MRM	—
Q9Z2I9	Sucla2	LYNLFLK	Cerebellum	—	100.0	MRM	—
Q9Z2I9	Sucla2	LYNLFLK	Cerebrum	—	100.0	MRM	—
Q9Z2L2	Hspb1	VSLDVNHFAPDELTVK	Cerebrum	—	100.0	MRM	—
Q9Z2L6	Minpp1	VLEYLNDLK	BrainStem	—	100.0	MRM	—
Q9Z2L6	Minpp1	VLEYLNDLK	Cerebellum	—	100.0	MRM	—
Q9Z2M7	Pmm2	IGVVGGSDFEK	BrainStem	—	100.0	MRM	—
Q9Z2M7	Pmm2	IGVVGGSDFEK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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