SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	Muscle	—	100.0	MRM+PRM	['Meth']
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	Pancreas	—	100.0	MRM+PRM	['Meth']
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	Spermatozoa	—	100.0	MRM+PRM	['Meth']
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	Spleen	—	100.0	MRM+PRM	['Meth']
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	Thymus	—	100.0	MRM+PRM	['Meth']
Q8BWT1	Acaa2	QTMQVDEHARPQTTLEQLQK	Thyroid	—	100.0	MRM+PRM	['Meth']
Q8C0I1	Agps	ESISDVGFGMLK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q8C0I1	Agps	ESISDVGFGMLK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q8CFA2	Amt	DLALMQDK	liver	—	100.0	MRM+PRM	['Meth']
Q8CFA2	Amt	MPFVPTNYYTLK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q8CHT0	Aldh4a1	DPQEPIMK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q8CHT0	Aldh4a1	DPQEPIMK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q8CHT0	Aldh4a1	DPQEPIMK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q8CHT0	Aldh4a1	DPQEPIMK	Heart	—	100.0	MRM+PRM	['Meth']
Q8CHT0	Aldh4a1	DPQEPIMK	kidney	—	100.0	MRM+PRM	['Meth']
Q8CHT0	Aldh4a1	DPQEPIMK	lung	—	100.0	MRM+PRM	['Meth']
Q8CI94	Pygb	TCFETFPDK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q8CI94	Pygb	TCFETFPDK	liver	—	100.0	MRM+PRM	['Cys']
Q8CIF4	Btd	ILSGDPYCEK	Cerebellum	—	100.0	MRM+PRM	['Cys']
Q8CIF4	Btd	ILSGDPYCEK	liver	—	100.0	MRM+PRM	['Cys']
Q8CIF4	Btd	ILSGDPYCEK	lung	—	100.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	Cerebrum	—	100.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	kidney	—	100.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	plasma	—	100.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	Spleen	—	100.0	MRM+PRM	['Cys']
Q8K0E8	Fgb	TPCTVSCNIPVVSGK	TailSkin	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	Cerebellum	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	Cerebrum	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	Heart	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	kidney	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	liver	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	lung	—	100.0	MRM+PRM	['Cys']
Q8K1B8	Fermt3	GCEVVPDVNVSGQK	plasma	—	100.0	MRM+PRM	['Cys']
Q8K358	Pigu	DGTEAMLVLK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q8K358	Pigu	DGTEAMLVLK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q8K358	Pigu	DGTEAMLVLK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	BoneMarrow	—	100.0	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	lung	—	100.0	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	SalivaryGland	—	100.0	MRM+PRM	['Meth']
Q8QZT1	Acat1	MLEIDPQK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
Q8R016	Blmh	DGEAVWFGCDVGK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	Cerebellum	—	100.0	MRM+PRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	Cerebrum	—	100.0	MRM+PRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	Heart	—	100.0	MRM+PRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	kidney	—	100.0	MRM+PRM	['Cys']
Q8R016	Blmh	DGEAVWFGCDVGK	liver	—	100.0	MRM+PRM	['Cys']

SysQuan Mouse Database

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