SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9QY76	Vapb	VEQVLSLEPQHELK	MockWholeBrain	—	100.0	MRM	—
Q9QYF1	Rdh11	IHFHNLQGEK	BrainStem	—	100.0	MRM	—
Q9QYF1	Rdh11	IHFHNLQGEK	Cerebellum	—	100.0	MRM	—
Q9QYF1	Rdh11	IHFHNLQGEK	Cerebrum	—	100.0	MRM	—
Q9QYF1	Rdh11	IHFHNLQGEK	MockWholeBrain	—	100.0	MRM	—
Q9QYJ3	Dnajb1	EGDQTSNNIPADIVFVLK	BrainStem	—	100.0	MRM	—
Q9QYJ3	Dnajb1	EGDQTSNNIPADIVFVLK	Cerebrum	—	100.0	MRM	—
Q9QYJ3	Dnajb1	EGDQTSNNIPADIVFVLK	MockWholeBrain	—	100.0	MRM	—
Q9QYS2	Grm3	LFQIPQISYASTSAK	BrainStem	—	100.0	MRM	—
Q9QYS2	Grm3	LFQIPQISYASTSAK	Cerebrum	—	100.0	MRM	—
Q9QYS2	Grm3	LFQIPQISYASTSAK	MockWholeBrain	—	100.0	MRM	—
Q9R008	Mvk	VILHGEHAVVHGK	BrainStem	—	100.0	MRM	—
Q9R008	Mvk	VILHGEHAVVHGK	Cerebellum	—	100.0	MRM	—
Q9R008	Mvk	VILHGEHAVVHGK	Cerebrum	—	100.0	MRM	—
Q9R008	Mvk	VILHGEHAVVHGK	MockWholeBrain	—	100.0	MRM	—
Q9R062	Gyg1	TDQAFVTLTTNDAYAK	BrainStem	—	100.0	MRM	—
Q9R062	Gyg1	TDQAFVTLTTNDAYAK	Cerebellum	—	100.0	MRM	—
Q9R062	Gyg1	TDQAFVTLTTNDAYAK	Cerebrum	—	100.0	MRM	—
Q9R0G7	Zeb2	AVLQPHENIVPNK	BrainStem	—	100.0	MRM	—
Q9R0G7	Zeb2	AVLQPHENIVPNK	Cerebrum	—	100.0	MRM	—
Q9R0G7	Zeb2	AVLQPHENIVPNK	MockWholeBrain	—	100.0	MRM	—
Q9R0Q6	Arpc1a	TQIALSPNNHEVHIYK	BrainStem	—	100.0	MRM	—
Q9R0Q6	Arpc1a	TQIALSPNNHEVHIYK	Cerebrum	—	100.0	MRM	—
Q9R0Q6	Arpc1a	TQIALSPNNHEVHIYK	MockWholeBrain	—	100.0	MRM	—
Q9R0Y5	Ak1	VDDNEETIK	Cerebrum	—	100.0	MRM	—
Q9R111	Gda	DHLLGVSDSGK	BrainStem	—	100.0	MRM	—
Q9R111	Gda	DHLLGVSDSGK	Cerebellum	—	100.0	MRM	—
Q9R111	Gda	DHLLGVSDSGK	Cerebrum	—	100.0	MRM	—
Q9R111	Gda	DHLLGVSDSGK	MockWholeBrain	—	100.0	MRM	—
Q9R112	Sqor	HFYQPIWTLVGAGAK	BrainStem	—	100.0	MRM	—
Q9R112	Sqor	HFYQPIWTLVGAGAK	Cerebellum	—	100.0	MRM	—
Q9R112	Sqor	HFYQPIWTLVGAGAK	Cerebrum	—	100.0	MRM	—
Q9R112	Sqor	HFYQPIWTLVGAGAK	MockWholeBrain	—	100.0	MRM	—
Q9R1J0	Nsdhl	ILTGLNYEAPK	BrainStem	—	100.0	MRM	—
Q9R1J0	Nsdhl	ILTGLNYEAPK	Cerebrum	—	100.0	MRM	—
Q9R1J0	Nsdhl	ILTGLNYEAPK	MockWholeBrain	—	100.0	MRM	—
Q9R1P0	Psma4	EVEQLIK	BrainStem	—	100.0	MRM	—
Q9R1P0	Psma4	EVEQLIK	Cerebellum	—	100.0	MRM	—
Q9R1P1	Psmb3	FGPYYTEPVIAGLDPK	BrainStem	—	100.0	MRM	—
Q9R1P1	Psmb3	FGPYYTEPVIAGLDPK	Cerebellum	—	100.0	MRM	—
Q9R1P4	Psma1	NVSIGIVGK	BrainStem	—	100.0	MRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	BrainStem	—	100.0	MRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Cerebellum	—	100.0	MRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	Cerebrum	—	100.0	MRM	—
Q9WU78	Pdcd6ip	NIQVSHQEFSK	MockWholeBrain	—	100.0	MRM	—
Q9WUM5	Suclg1	LVGGTTPGK	Cerebellum	—	100.0	MRM	—
Q9WUM5	Suclg1	QGTFHSQQALEYGTK	BrainStem	—	100.0	MRM	—
Q9WUM5	Suclg1	QGTFHSQQALEYGTK	Cerebrum	—	100.0	MRM	—
Q9WUR9	Ak4	AVILGPPGSGK	BrainStem	—	100.0	MRM	—
Q9WUR9	Ak4	AVILGPPGSGK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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