SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
Q3TVK4	Capzb	GCWDSIHVVEVQEK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q3TVK4	Capzb	GCWDSIHVVEVQEK	TailSkin	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Cerebellum	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Cerebrum	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	lung	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Pancreas	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	plasma	—	100.0	MRM+PRM	['Cys']
Q3U2G2	Hspa4	GCALQCAILSPAFK	Spleen	—	100.0	MRM+PRM	['Cys']
Q3U4D1	—	DGPLNMILDDGGDLTNLIHTK	liver	—	100.0	MRM+PRM	['Meth']
Q3U4U1	Postn	DQGPNVCALQQILGTK	liver	—	100.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Cerebrum	—	100.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Heart	—	100.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Muscle	—	100.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Thymus	—	100.0	MRM+PRM	['Cys']
Q3U6U7	Wars1	GIFGFTDSDCIGK	Thyroid	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	BrainStem	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Cerebellum	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Cerebrum	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Heart	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	kidney	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	liver	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	lung	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	LymphNodes	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Pancreas	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	SalivaryGland	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	SmallIntestines	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Spleen	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	TailSkin	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Thymus	—	100.0	MRM+PRM	['Cys']
Q3UAS2	Capza1	TIDGQQTIIACIESHQFQPK	Thyroid	—	100.0	MRM+PRM	['Cys']
Q3UBA6	Hspa8	VCNPIITK	lung	—	100.0	MRM+PRM	['Cys']
Q3UBG4	Tgfbi	STVISYECCPGYEK	LymphNodes	—	100.0	MRM+PRM	['Cys']
Q3UEA1	Acly	AFDSGIIPMEFVNK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q3UL78	Cdc42	YVECSALTQK	LymphNodes	—	100.0	MRM+PRM	['Cys']
Q3UN31	Pla2g6	GEHGNTPLHLAMSK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q3UN31	Pla2g6	GEHGNTPLHLAMSK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q3UN31	Pla2g6	GEHGNTPLHLAMSK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q3UN31	Pla2g6	GEHGNTPLHLAMSK	lung	—	100.0	MRM+PRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	BrainStem	—	100.0	MRM+PRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	Cerebellum	—	100.0	MRM+PRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	Cerebrum	—	100.0	MRM+PRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
Q3UUI3	Them4	LLFDQFMK	Thyroid	—	100.0	MRM+PRM	['Meth']
Q3UW64	Gne	GEDEAAMVESVGLALVK	SalivaryGland	—	100.0	MRM+PRM	['Meth']
Q3V117	Acly	AFDSGIIPMEFVNK	BrainStem	—	100.0	MRM+PRM	['Meth']

SysQuan Mouse Database

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