SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9JHU4	Dync1h1	VDDLLIIEEK	Cerebrum	—	100.0	MRM	—
Q9JHW2	Nit2	IHLFDIDVPGK	BrainStem	—	100.0	MRM	—
Q9JHW2	Nit2	IHLFDIDVPGK	Cerebellum	—	100.0	MRM	—
Q9JHW2	Nit2	IHLFDIDVPGK	Cerebrum	—	100.0	MRM	—
Q9JHW2	Nit2	IHLFDIDVPGK	MockWholeBrain	—	100.0	MRM	—
Q9JI75	Nqo2	VLIVYAHQEPK	BrainStem	—	100.0	MRM	—
Q9JI75	Nqo2	VLIVYAHQEPK	Cerebellum	—	100.0	MRM	—
Q9JI75	Nqo2	VLIVYAHQEPK	Cerebrum	—	100.0	MRM	—
Q9JI75	Nqo2	VLIVYAHQEPK	MockWholeBrain	—	100.0	MRM	—
Q9JII6	Akr1a1	EELFVTSK	BrainStem	—	100.0	MRM	—
Q9JJU8	Sh3bgrl	VYIASSSGSTAIK	BrainStem	—	100.0	MRM	—
Q9JJU8	Sh3bgrl	VYIASSSGSTAIK	Cerebellum	—	100.0	MRM	—
Q9JK38	Gnpnat1	LLLSTLTLLSK	BrainStem	—	100.0	MRM	—
Q9JK38	Gnpnat1	LLLSTLTLLSK	Cerebellum	—	100.0	MRM	—
Q9JK38	Gnpnat1	LLLSTLTLLSK	Cerebrum	—	100.0	MRM	—
Q9JK38	Gnpnat1	LLLSTLTLLSK	MockWholeBrain	—	100.0	MRM	—
Q9JKF6	Nectin1	ITQVTWQK	BrainStem	—	100.0	MRM	—
Q9JKN6	Nova1	RPLEAPPEAGSTK	BrainStem	—	100.0	MRM	—
Q9JKN6	Nova1	RPLEAPPEAGSTK	Cerebellum	—	100.0	MRM	—
Q9JKX6	Nudt5	ELEEETGYK	BrainStem	—	100.0	MRM	—
Q9JLN9	Mtor	YHPQALIYPLTVASK	BrainStem	—	100.0	MRM	—
Q9JLN9	Mtor	YHPQALIYPLTVASK	Cerebellum	—	100.0	MRM	—
Q9JLN9	Mtor	YHPQALIYPLTVASK	Cerebrum	—	100.0	MRM	—
Q9JLN9	Mtor	YHPQALIYPLTVASK	MockWholeBrain	—	100.0	MRM	—
Q9JLV5	Cul3	GLTEQEVETILDK	BrainStem	—	100.0	MRM	—
Q9JLV5	Cul3	GLTEQEVETILDK	Cerebellum	—	100.0	MRM	—
Q9JLV5	Cul3	GLTEQEVETILDK	Cerebrum	—	100.0	MRM	—
Q9JLV5	Cul3	GLTEQEVETILDK	MockWholeBrain	—	100.0	MRM	—
Q9JLV5	Cul3	VLTTGYWPTQSATPK	BrainStem	—	100.0	MRM	—
Q9JLV5	Cul3	VLTTGYWPTQSATPK	Cerebrum	—	100.0	MRM	—
Q9JMD3	Stard10	SSQFLAPK	Cerebrum	—	100.0	MRM	—
Q9QUJ7	Acsl4	LILGNYK	BrainStem	—	100.0	MRM	—
Q9QUJ7	Acsl4	LILGNYK	Cerebellum	—	100.0	MRM	—
Q9QUJ7	Acsl4	LILGNYK	Cerebrum	—	100.0	MRM	—
Q9QUJ7	Acsl4	LILGNYK	MockWholeBrain	—	100.0	MRM	—
Q9QUJ7	Acsl4	LSPEPWTPETGLVTDAFK	BrainStem	—	100.0	MRM	—
Q9QUJ7	Acsl4	LSPEPWTPETGLVTDAFK	Cerebellum	—	100.0	MRM	—
Q9QUJ7	Acsl4	LSPEPWTPETGLVTDAFK	Cerebrum	—	100.0	MRM	—
Q9QUR8	Sema7a	GDQGGESSLSVSK	BrainStem	—	100.0	MRM	—
Q9QUR8	Sema7a	GDQGGESSLSVSK	Cerebrum	—	100.0	MRM	—
Q9QXG4	Acss2	FETTYFK	BrainStem	—	100.0	MRM	—
Q9QXG4	Acss2	FETTYFK	Cerebellum	—	100.0	MRM	—
Q9QXG4	Acss2	LWSIVDK	BrainStem	—	100.0	MRM	—
Q9QXG4	Acss2	LWSIVDK	Cerebellum	—	100.0	MRM	—
Q9QXG4	Acss2	LWSIVDK	Cerebrum	—	100.0	MRM	—
Q9QXG4	Acss2	LWSIVDK	MockWholeBrain	—	100.0	MRM	—
Q9QXY6	Ehd3	LDISDEFSEVIK	BrainStem	—	100.0	MRM	—
Q9QXY6	Ehd3	LDISDEFSEVIK	Cerebrum	—	100.0	MRM	—
Q9QXZ0	Macf1	ELEEAVTSALQQETEK	Cerebrum	—	100.0	MRM	—
Q9QY76	Vapb	VEQVLSLEPQHELK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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