SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P28653	Bgn	VVQCSDLGLK	Thyroid	—	100.0	MRM+PRM	['Cys']
P28654	Dcn	VVQCSDLGLDK	liver	—	100.0	MRM+PRM	['Cys']
P28654	Dcn	VVQCSDLGLDK	lung	—	100.0	MRM+PRM	['Cys']
P28654	Dcn	VVQCSDLGLDK	TailSkin	—	100.0	MRM+PRM	['Cys']
P29699	Ahsg	CNLLAEK	Heart	—	100.0	MRM+PRM	['Cys']
P29699	Ahsg	CNLLAEK	kidney	—	100.0	MRM+PRM	['Cys']
P29699	Ahsg	CNLLAEK	lung	—	100.0	MRM+PRM	['Cys']
P29699	Ahsg	CNLLAEK	Muscle	—	100.0	MRM+PRM	['Cys']
P29699	Ahsg	CNLLAEK	plasma	—	100.0	MRM+PRM	['Cys']
P29699	Ahsg	CNLLAEK	TailSkin	—	100.0	MRM+PRM	['Cys']
P32921	Wars1	GIFGFTDSDCIGK	liver	—	100.0	MRM+PRM	['Cys']
P32921	Wars1	GIFGFTDSDCIGK	TailSkin	—	100.0	MRM+PRM	['Cys']
P32921	Wars1	GIFGFTDSDCIGK	Thyroid	—	100.0	MRM+PRM	['Cys']
P34914	Ephx2	EMVTFLDK	BrainStem	—	100.0	MRM+PRM	['Meth']
P34914	Ephx2	EMVTFLDK	Cerebrum	—	100.0	MRM+PRM	['Meth']
P34914	Ephx2	EMVTFLDK	LymphNodes	—	100.0	MRM+PRM	['Meth']
P35235	Ptpn11	GVDCDIDVPK	Cerebrum	—	100.0	MRM+PRM	['Cys']
P35235	Ptpn11	GVDCDIDVPK	liver	—	100.0	MRM+PRM	['Cys']
P35235	Ptpn11	GVDCDIDVPK	Muscle	—	100.0	MRM+PRM	['Cys']
P35235	Ptpn11	GVDCDIDVPK	Spleen	—	100.0	MRM+PRM	['Cys']
P35486	Pdha1	MVNSNLASVEELK	Cerebellum	—	100.0	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	Cerebrum	—	100.0	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	liver	—	100.0	MRM+PRM	['Meth']
P35486	Pdha1	MVNSNLASVEELK	lung	—	100.0	MRM+PRM	['Meth']
P35917	Flt4	YLCSVCNAK	plasma	—	100.0	MRM+PRM	['Cys']
P35991	Btk	NCLVNDQGVVK	lung	—	100.0	MRM+PRM	['Cys']
P39655	Alox12	LVLPSGMEELQAQLEK	Heart	—	100.0	MRM+PRM	['Meth']
P39655	Alox12	LVLPSGMEELQAQLEK	lung	—	100.0	MRM+PRM	['Meth']
P39655	Alox12	LVLPSGMEELQAQLEK	SalivaryGland	—	100.0	MRM+PRM	['Meth']
P39655	Alox12	LVLPSGMEELQAQLEK	Spleen	—	100.0	MRM+PRM	['Meth']
P39876	Timp3	SCYYLPCFVTSK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	BrainStem	—	100.0	MRM+PRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	Cerebellum	—	100.0	MRM+PRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	Heart	—	100.0	MRM+PRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	liver	—	100.0	MRM+PRM	['Cys']
P39876	Timp3	SCYYLPCFVTSK	plasma	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	BrainStem	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	Cerebellum	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	Cerebrum	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	kidney	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	lung	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	Spleen	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	CVNTTLQIK	Thymus	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	BrainStem	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	Cerebellum	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	Cerebrum	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	kidney	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	liver	—	100.0	MRM+PRM	['Cys']
P40124	Cap1	NSLDCEIVSAK	lung	—	100.0	MRM+PRM	['Cys']

SysQuan Mouse Database

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