SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9DCL9	Paics	IATGSFLK	MockWholeBrain	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	BrainStem	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	Cerebellum	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	Cerebrum	—	100.0	MRM	—
Q9DCM0	Ethe1	TLYHSVHEK	MockWholeBrain	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	BrainStem	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	Cerebellum	—	100.0	MRM	—
Q9DCT2	Ndufs3	QLSAFGEYVAEILPK	MockWholeBrain	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	BrainStem	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	Cerebellum	—	100.0	MRM	—
Q9DCW4	Etfb	VETTEDLVAK	MockWholeBrain	—	100.0	MRM	—
Q9EPJ9	Arfgap1	DVTTFFSGK	Cerebrum	—	100.0	MRM	—
Q9EQ06	Hsd17b11	LTAYEFAK	BrainStem	—	100.0	MRM	—
Q9EQ06	Hsd17b11	LTAYEFAK	Cerebrum	—	100.0	MRM	—
Q9EQ20	Aldh6a1	LITLEQGK	BrainStem	—	100.0	MRM	—
Q9EQ20	Aldh6a1	LITLEQGK	Cerebellum	—	100.0	MRM	—
Q9EQ20	Aldh6a1	LITLEQGK	Cerebrum	—	100.0	MRM	—
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	BrainStem	—	100.0	MRM	—
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	Cerebellum	—	100.0	MRM	—
Q9EQ20	Aldh6a1	VNAGDQPGADLGPLITPQAK	Cerebrum	—	100.0	MRM	—
Q9EQG9	Cert1	GEAITFK	BrainStem	—	100.0	MRM	—
Q9EQG9	Cert1	GEAITFK	Cerebrum	—	100.0	MRM	—
Q9EQH3	Vps35	LLDEAIQAVK	Cerebrum	—	100.0	MRM	—
Q9ERK4	Cse1l	LVLDAFALPLTNLFK	Cerebellum	—	100.0	MRM	—
Q9ERK4	Cse1l	LVLDAFALPLTNLFK	Cerebrum	—	100.0	MRM	—
Q9ERL9	Gucy1a1	DVEDGNANFLGK	Cerebrum	—	100.0	MRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	BrainStem	—	100.0	MRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	Cerebellum	—	100.0	MRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	Cerebrum	—	100.0	MRM	—
Q9ERR7	Selenof	WNTDSVEEFLSEK	MockWholeBrain	—	100.0	MRM	—
Q9ES46	Parvb	LNVAEVTQSEIGQK	Cerebellum	—	100.0	MRM	—
Q9ESW4	Agk	YWYLGPLK	Cerebellum	—	100.0	MRM	—
Q9ESW4	Agk	YWYLGPLK	Cerebrum	—	100.0	MRM	—
Q9ESW4	Agk	YWYLGPLK	MockWholeBrain	—	100.0	MRM	—
Q9ET01	Pygl	HLEIIYEINQK	Cerebrum	—	100.0	MRM	—
Q9JHI5	Ivd	GITAFIVEK	BrainStem	—	100.0	MRM	—
Q9JHI5	Ivd	GITAFIVEK	Cerebellum	—	100.0	MRM	—
Q9JHI5	Ivd	GITAFIVEK	Cerebrum	—	100.0	MRM	—
Q9JHI5	Ivd	QYVYNVAK	BrainStem	—	100.0	MRM	—
Q9JHI5	Ivd	QYVYNVAK	Cerebrum	—	100.0	MRM	—
Q9JHJ0	Tmod3	ILPVFDEPPNPTNVEESLK	BrainStem	—	100.0	MRM	—
Q9JHJ0	Tmod3	ILPVFDEPPNPTNVEESLK	Cerebellum	—	100.0	MRM	—
Q9JHJ0	Tmod3	ILPVFDEPPNPTNVEESLK	Cerebrum	—	100.0	MRM	—
Q9JHJ0	Tmod3	ILPVFDEPPNPTNVEESLK	MockWholeBrain	—	100.0	MRM	—
Q9JHU4	Dync1h1	LAETVFNFQEK	Cerebellum	—	100.0	MRM	—
Q9JHU4	Dync1h1	LGGSPFGPAGTGK	BrainStem	—	100.0	MRM	—
Q9JHU4	Dync1h1	LGGSPFGPAGTGK	Cerebellum	—	100.0	MRM	—
Q9JHU4	Dync1h1	LGGSPFGPAGTGK	Cerebrum	—	100.0	MRM	—
Q9JHU4	Dync1h1	VDDLLIIEEK	BrainStem	—	100.0	MRM	—
Q9JHU4	Dync1h1	VDDLLIIEEK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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