SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	BrainStem	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Cerebellum	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Heart	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	lung	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	plasma	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Spleen	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	TailSkin	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	LATGSDDNCAAFFEGPPFK	Thyroid	—	100.0	MRM+PRM	['Cys']
O88587	Comt	YDVDTLDMVFLDHWK	BrainStem	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Heart	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	kidney	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	liver	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	liver	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	lung	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Spermatozoa	—	100.0	MRM+PRM	['Meth']
O88587	Comt	YDVDTLDMVFLDHWK	Spleen	—	100.0	MRM+PRM	['Meth']
O88783	F5	FCENPDEVK	liver	—	100.0	MRM+PRM	['Cys']
O88783	F5	FCENPDEVK	lung	—	100.0	MRM+PRM	['Cys']
O88844	Idh1	SIEDFAHSSFQMALSK	Cerebellum	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	Heart	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	kidney	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	lung	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	LymphNodes	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	Thymus	—	100.0	MRM+PRM	['Meth']
O88844	Idh1	SIEDFAHSSFQMALSK	Thyroid	—	100.0	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	Cerebellum	—	100.0	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	Cerebrum	—	100.0	MRM+PRM	['Meth']
O88876	Dhrs3	SLMDSDDDALLK	Heart	—	100.0	MRM+PRM	['Meth']
O88958	Gnpda1	TVFVCDEDATLELK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	BrainStem	—	100.0	MRM+PRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	Cerebellum	—	100.0	MRM+PRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	Heart	—	100.0	MRM+PRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	SalivaryGland	—	100.0	MRM+PRM	['Cys']
O88958	Gnpda1	TVFVCDEDATLELK	Thymus	—	100.0	MRM+PRM	['Cys']
O89020	Afm	LCFFYNK	plasma	—	100.0	MRM+PRM	['Cys']
O89020	Afm	TINPAVDHCCK	Heart	—	100.0	MRM+PRM	['Cys']
O89020	Afm	TINPAVDHCCK	kidney	—	100.0	MRM+PRM	['Cys']
O89020	Afm	TINPAVDHCCK	liver	—	100.0	MRM+PRM	['Cys']
O89020	Afm	TINPAVDHCCK	lung	—	100.0	MRM+PRM	['Cys']
O89020	Afm	TINPAVDHCCK	plasma	—	100.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	BrainStem	—	100.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	kidney	—	100.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	liver	—	100.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	Pancreas	—	100.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	plasma	—	100.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	Spleen	—	100.0	MRM+PRM	['Cys']
O89053	Coro1a	VSQTTWDSGFCAVNPK	TailSkin	—	100.0	MRM+PRM	['Cys']

SysQuan Mouse Database

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