SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
O54890	Itgb3	GECLCGQCVCHSSDFGK	liver	—	100.0	MRM+PRM	['Cys']
O54890	Itgb3	GECLCGQCVCHSSDFGK	lung	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	Cerebellum	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	liver	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	LymphNodes	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	Muscle	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	Pancreas	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	SmallIntestines	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	Spermatozoa	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	TailSkin	—	100.0	MRM+PRM	['Cys']
O55131	Septin7	ADTLTPEECQQFK	Thyroid	—	100.0	MRM+PRM	['Cys']
O55143	Atp2a2	SLPSVETLGCTSVICSDK	Cerebrum	—	100.0	MRM+PRM	['Cys']
O55143	Atp2a2	SLPSVETLGCTSVICSDK	kidney	—	100.0	MRM+PRM	['Cys']
O55143	Atp2a2	SLPSVETLGCTSVICSDK	Pancreas	—	100.0	MRM+PRM	['Cys']
O55143	Atp2a2	VGEATETALTCLVEK	kidney	—	100.0	MRM+PRM	['Cys']
O55143	Atp2a2	VGEATETALTCLVEK	TailSkin	—	100.0	MRM+PRM	['Cys']
O70252	Hmox2	YMGDLSGGQVLK	kidney	—	100.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	liver	—	100.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	LymphNodes	—	100.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	SmallIntestines	—	100.0	MRM+PRM	['Meth']
O70252	Hmox2	YMGDLSGGQVLK	Thymus	—	100.0	MRM+PRM	['Meth']
O70325	Gpx4	ICVNGDDAHPLWK	BoneMarrow	—	100.0	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	BrainStem	—	100.0	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	Cerebellum	—	100.0	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	lung	—	100.0	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	SalivaryGland	—	100.0	MRM+PRM	['Cys']
O70325	Gpx4	ICVNGDDAHPLWK	Thyroid	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	BrainStem	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Cerebellum	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Cerebrum	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Heart	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	liver	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	lung	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	LymphNodes	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Muscle	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Pancreas	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	SalivaryGland	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Spleen	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Thymus	—	100.0	MRM+PRM	['Cys']
O70400	Pdlim1	GHFFVEDQIYCEK	Thyroid	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	BrainStem	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	Cerebellum	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	Cerebrum	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	liver	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	lung	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	Muscle	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	TailSkin	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	Thymus	—	100.0	MRM+PRM	['Cys']
O88342	Wdr1	GPVTDVAYSHDGAFLAVCDASK	Thyroid	—	100.0	MRM+PRM	['Cys']

SysQuan Mouse Database

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