SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
A0A1L1SRX2	Ampd3	MLENIFLPLFK	BrainStem	—	100.0	MRM+PRM	['Meth']
A0A1L1SRX2	Ampd3	MLENIFLPLFK	Cerebellum	—	100.0	MRM+PRM	['Meth']
A0A1L1SRX2	Ampd3	MLENIFLPLFK	Heart	—	100.0	MRM+PRM	['Meth']
A0A1L1SRX2	Ampd3	MLENIFLPLFK	kidney	—	100.0	MRM+PRM	['Meth']
A0A1L1SRX2	Ampd3	MLENIFLPLFK	lung	—	100.0	MRM+PRM	['Meth']
A0A2R8VHP9	Pcbp2	LVVPASQCGSLIGK	Cerebrum	—	100.0	MRM+PRM	['Cys']
A0A2R8VKN0	Pcbp2	LVVPASQCGSLIGK	liver	—	100.0	MRM+PRM	['Cys']
A0A338P695	Smpd4	VFAQPNLAEMIQK	lung	—	100.0	MRM+PRM	['Meth']
A0A338P6S3	Smpd4	VFAQPNLAEMIQK	kidney	—	100.0	MRM+PRM	['Meth']
A0A338P6S3	Smpd4	VFAQPNLAEMIQK	liver	—	100.0	MRM+PRM	['Meth']
A0A5E1	Igfbp7	GTCEQGPSIVTPPK	Heart	—	100.0	MRM+PRM	['Cys']
A0AAQ4VMY7	Dpysl2	GLYDGPVCEVSVTPK	Thyroid	—	100.0	MRM+PRM	['Cys']
A1BN54	Actn1	CQLEINFNTLQTK	Cerebrum	—	100.0	MRM+PRM	['Cys']
A1BN54	Actn1	ICDQWDNLGALTQK	Cerebrum	—	100.0	MRM+PRM	['Cys']
A1BN54	Actn1	ICDQWDNLGALTQK	Thyroid	—	100.0	MRM+PRM	['Cys']
A2A841	Epb41	VSLLDDTVYECVVEK	lung	—	100.0	MRM+PRM	['Cys']
A2AD32	Epb41	VSLLDDTVYECVVEK	Heart	—	100.0	MRM+PRM	['Cys']
A2AEX6	Fhl1	FTAVEDQYYCVDCYK	kidney	—	100.0	MRM+PRM	['Cys']
A2AEX6	Fhl1	FTAVEDQYYCVDCYK	liver	—	100.0	MRM+PRM	['Cys']
A2AL50	Agps	ESISDVGFGMLK	BrainStem	—	100.0	MRM+PRM	['Meth']
A2CG49	Kalrn	AGLECSDIEK	BrainStem	—	100.0	MRM+PRM	['Cys']
A2CG49	Kalrn	AGLECSDIEK	kidney	—	100.0	MRM+PRM	['Cys']
A2CG49	Kalrn	AGLECSDIEK	lung	—	100.0	MRM+PRM	['Cys']
B2M1R7	Pcbp2	LVVPASQCGSLIGK	Heart	—	100.0	MRM+PRM	['Cys']
B2RSH2	Gnai1	LFDSICNNK	SalivaryGland	—	100.0	MRM+PRM	['Cys']
B2RXS4	Plxnb2	LVECGSLFK	Cerebellum	—	100.0	MRM+PRM	['Cys']
B2RXS4	Plxnb2	LVECGSLFK	Cerebrum	—	100.0	MRM+PRM	['Cys']
B2RXS4	Plxnb2	LVECGSLFK	Heart	—	100.0	MRM+PRM	['Cys']
B2RXS4	Plxnb2	LVECGSLFK	plasma	—	100.0	MRM+PRM	['Cys']
B7FAU9	Flna	EEPCLLK	SmallIntestines	—	100.0	MRM+PRM	['Cys']
B7FAU9	Flna	TPCEEILVK	SmallIntestines	—	100.0	MRM+PRM	['Cys']
D3Z534	Kalrn	AGLECSDIEK	liver	—	100.0	MRM+PRM	['Cys']
E9Q1G8	Septin7	ADTLTPEECQQFK	Cerebellum	—	100.0	MRM+PRM	['Cys']
E9Q1G8	Septin7	ADTLTPEECQQFK	Heart	—	100.0	MRM+PRM	['Cys']
E9Q1G8	Septin7	ADTLTPEECQQFK	lung	—	100.0	MRM+PRM	['Cys']
E9Q414	Apob	MGLAFESTK	plasma	—	100.0	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	Cerebellum	—	100.0	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	Cerebrum	—	100.0	MRM+PRM	['Meth']
E9QB02	Mars1	NPEQVDLYQFMAK	liver	—	100.0	MRM+PRM	['Meth']
E9QP62	Lims1	CHAIIDEQPLIFK	lung	—	100.0	MRM+PRM	['Cys']
E9QP62	Lims1	CHAIIDEQPLIFK	Thyroid	—	100.0	MRM+PRM	['Cys']
E9QP62	Lims1	NDPYHPDHFNCANCGK	lung	—	100.0	MRM+PRM	['Cys']
E9QP62	Lims1	NDPYHPDHFNCANCGK	Thyroid	—	100.0	MRM+PRM	['Cys']
E9QPU1	Vwf	VTGCPPFDEHK	lung	—	100.0	MRM+PRM	['Cys']
F6ZFT1	Ndufab1	LSVNSHFMK	BrainStem	—	100.0	MRM+PRM	['Meth']
F6ZFT1	Ndufab1	LSVNSHFMK	Cerebrum	—	100.0	MRM+PRM	['Meth']
F6ZFT1	Ndufab1	LSVNSHFMK	kidney	—	100.0	MRM+PRM	['Meth']
G3UX26	Vdac2	WCEYGLTFTEK	Cerebellum	—	100.0	MRM+PRM	['Cys']
G3UX26	Vdac2	WCEYGLTFTEK	Heart	—	100.0	MRM+PRM	['Cys']
O08553	Dpysl2	GLYDGPVCEVSVTPK	lung	—	100.0	MRM+PRM	['Cys']

SysQuan Mouse Database

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