SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Missed Cleav.	Assays Available	PTM
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	lung	—	—	0	MRM+PRM	—
Q9Z2M7	Pmm2	YDYVFPENGLVAYK	plasma	—	—	0	MRM+PRM	—
Q9Z2X1	Hnrnpf	ITGEAFVQFASQELAEK	plasma	—	—	0	MRM+PRM	—
Q9Z2Z6	Slc25a20	FQTAPPGK	SalivaryGland	—	—	0	MRM+PRM	—
A0A0G2JEU1	Aldh2	YYAGWADKYHGK	TailSkin	—	—	1	MRM+PRM	—
P26039	Tln1	ASSLIEEAKK	SmallIntestines	—	—	1	MRM+PRM	—
P45878	Fkbp2	KLVIPSELGYGER	Spleen	—	—	1	MRM+PRM	—
Q8VCM7	Fgg	KNWIQYK	liver	—	—	1	MRM+PRM	—
A0A068WAQ5	Epb41	VSLLDDTVYECVVEK	Heart	—	100.0	0	MRM+PRM	['Cys']
A0A068WAQ5	Epb41	VSLLDDTVYECVVEK	liver	—	100.0	0	MRM+PRM	['Cys']
A0A068WAZ7	Epb41	VSLLDDTVYECVVEK	kidney	—	100.0	0	MRM+PRM	['Cys']
A0A068WAZ7	Epb41	VSLLDDTVYECVVEK	liver	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	DQCIVDDITYNVNDTFHK	plasma	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	GEWTCKPIAEK	liver	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	GEWTCKPIAEK	lung	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	GEWTCKPIAEK	plasma	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	WCGTTQNYDADQK	liver	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	WCGTTQNYDADQK	lung	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	WCGTTQNYDADQK	plasma	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	WCGTTQNYDADQK	Spleen	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	WCHDNGVNYK	liver	—	100.0	0	MRM+PRM	['Cys']
A0A087WR50	Fn1	WCHDNGVNYK	plasma	—	100.0	0	MRM+PRM	['Cys']
A0A087WSN6	Fn1	GEWTCKPIAEK	BoneMarrow	—	100.0	0	MRM+PRM	['Cys']
A0A087WSN6	Fn1	GEWTCKPIAEK	Heart	—	100.0	0	MRM+PRM	['Cys']
A0A087WSN6	Fn1	WCGTTQNYDADQK	Cerebellum	—	100.0	0	MRM+PRM	['Cys']
A0A087WSN6	Fn1	WCGTTQNYDADQK	Heart	—	100.0	0	MRM+PRM	['Cys']
A0A087WSN6	Fn1	WCGTTQNYDADQK	kidney	—	100.0	0	MRM+PRM	['Cys']
A0A087WSN6	Fn1	WCGTTQNYDADQK	LymphNodes	—	100.0	0	MRM+PRM	['Cys']
A0A087WSN6	Fn1	WCGTTQNYDADQK	Thyroid	—	100.0	0	MRM+PRM	['Cys']
A0A0A6YY47	Ncam1	FFLCQVAGDAK	BoneMarrow	—	100.0	0	MRM+PRM	['Cys']
A0A0A6YY47	Ncam1	FFLCQVAGDAK	Cerebellum	—	100.0	0	MRM+PRM	['Cys']
A0A0A6YY47	Ncam1	FFLCQVAGDAK	lung	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	BoneMarrow	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	BrainStem	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	Cerebellum	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	Cerebrum	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	LymphNodes	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	SalivaryGland	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	SmallIntestines	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	CHAIIDEQPLIFK	Spleen	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	GELYCLPCHDK	BoneMarrow	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	GELYCLPCHDK	SmallIntestines	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	NDPYHPDHFNCANCGK	BoneMarrow	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	NDPYHPDHFNCANCGK	BrainStem	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	NDPYHPDHFNCANCGK	Cerebellum	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	NDPYHPDHFNCANCGK	liver	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	NDPYHPDHFNCANCGK	LymphNodes	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	NDPYHPDHFNCANCGK	SalivaryGland	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J005	Lims1	NDPYHPDHFNCANCGK	SmallIntestines	—	100.0	0	MRM+PRM	['Cys']
A0A0R4J0B4	Cmas	HLIEMGYLQGGK	liver	—	100.0	0	MRM+PRM	['Meth']

SysQuan Mouse Database

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