SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9D8E6	Rpl4	IEEVPELPLVVEDK	BrainStem	—	100.0	MRM	—
Q9D8E6	Rpl4	IEEVPELPLVVEDK	Cerebellum	—	100.0	MRM	—
Q9D8E6	Rpl4	IEEVPELPLVVEDK	MockWholeBrain	—	100.0	MRM	—
Q9D8N0	Eef1g	STFVLDEFK	BrainStem	—	100.0	MRM	—
Q9D8N0	Eef1g	STFVLDEFK	Cerebellum	—	100.0	MRM	—
Q9D8N0	Eef1g	STFVLDEFK	Cerebrum	—	100.0	MRM	—
Q9D964	Gatm	RPDPIDWSLK	BrainStem	—	100.0	MRM	—
Q9D9V3	Echdc1	VIELENWTEGK	MockWholeBrain	—	100.0	MRM	—
Q9DAK9	Phpt1	WAEYHADIYDK	BrainStem	—	100.0	MRM	—
Q9DAK9	Phpt1	WAEYHADIYDK	Cerebellum	—	100.0	MRM	—
Q9DBC7	Prkar1a	LTVADALEPVQFEDGQK	BrainStem	—	100.0	MRM	—
Q9DBC7	Prkar1a	LTVADALEPVQFEDGQK	Cerebellum	—	100.0	MRM	—
Q9DBC7	Prkar1a	LTVADALEPVQFEDGQK	Cerebrum	—	100.0	MRM	—
Q9DBC7	Prkar1a	LTVADALEPVQFEDGQK	MockWholeBrain	—	100.0	MRM	—
Q9DBF1	Aldh7a1	QGLSSSIFTK	Cerebrum	—	100.0	MRM	—
Q9DBF1	Aldh7a1	VNLLSFTGSTQVGK	Cerebellum	—	100.0	MRM	—
Q9DBF1	Aldh7a1	VNLLSFTGSTQVGK	Cerebrum	—	100.0	MRM	—
Q9DBG6	Rpn2	TGQEVVFVAEPDNK	Cerebrum	—	100.0	MRM	—
Q9DBH5	Lman2	LVPGPVFGSK	BrainStem	—	100.0	MRM	—
Q9DBH5	Lman2	LVPGPVFGSK	Cerebellum	—	100.0	MRM	—
Q9DBH5	Lman2	LVPGPVFGSK	MockWholeBrain	—	100.0	MRM	—
Q9DBJ1	Pgam1	ALPFWNEEIVPQIK	Cerebrum	—	100.0	MRM	—
Q9DBJ1	Pgam1	ALPFWNEEIVPQIK	MockWholeBrain	—	100.0	MRM	—
Q9DBJ1	Pgam1	FSGWYDADLSPAGHEEAK	BrainStem	—	100.0	MRM	—
Q9DBJ1	Pgam1	FSGWYDADLSPAGHEEAK	Cerebellum	—	100.0	MRM	—
Q9DBJ1	Pgam1	HYGGLTGLNK	Cerebellum	—	100.0	MRM	—
Q9DBJ1	Pgam1	HYGGLTGLNK	Cerebrum	—	100.0	MRM	—
Q9DBJ1	Pgam1	HYGGLTGLNK	MockWholeBrain	—	100.0	MRM	—
Q9DBL1	Acadsb	IGTIYEGASNIQLNTIAK	BrainStem	—	100.0	MRM	—
Q9DBL1	Acadsb	IGTIYEGASNIQLNTIAK	Cerebrum	—	100.0	MRM	—
Q9DBL1	Acadsb	IGTIYEGASNIQLNTIAK	MockWholeBrain	—	100.0	MRM	—
Q9DBL7	Coasy	AYAPGGPAYQPVVEAFGTDILHK	Cerebellum	—	100.0	MRM	—
Q9DBL7	Coasy	AYAPGGPAYQPVVEAFGTDILHK	Cerebrum	—	100.0	MRM	—
Q9DBL7	Coasy	AYAPGGPAYQPVVEAFGTDILHK	MockWholeBrain	—	100.0	MRM	—
Q9DBP5	Cmpk1	NPDSQYGELIEK	BrainStem	—	100.0	MRM	—
Q9DBP5	Cmpk1	NPDSQYGELIEK	Cerebellum	—	100.0	MRM	—
Q9DBP5	Cmpk1	NPDSQYGELIEK	Cerebrum	—	100.0	MRM	—
Q9DBP5	Cmpk1	NPDSQYGELIEK	MockWholeBrain	—	100.0	MRM	—
Q9DC33	Hmg20a	SVFDIPIFTEEFLNHSK	BrainStem	—	100.0	MRM	—
Q9DC33	Hmg20a	SVFDIPIFTEEFLNHSK	Cerebrum	—	100.0	MRM	—
Q9DCC4	Pycr3	IAAQTLLGTAK	Cerebellum	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	BrainStem	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	Cerebellum	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	Cerebrum	—	100.0	MRM	—
Q9DCD0	Pgd	NPELQNLLLDDFFK	MockWholeBrain	—	100.0	MRM	—
Q9DCD0	Pgd	VDDFLANEAK	BrainStem	—	100.0	MRM	—
Q9DCD0	Pgd	VDDFLANEAK	Cerebellum	—	100.0	MRM	—
Q9DCD0	Pgd	VDDFLANEAK	Cerebrum	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	BrainStem	—	100.0	MRM	—
Q9DCL9	Paics	IATGSFLK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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