SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9D0F9	Pgm1	VDLGVLGK	BrainStem	—	100.0	MRM	—
Q9D0F9	Pgm1	VDLGVLGK	Cerebellum	—	100.0	MRM	—
Q9D0F9	Pgm1	VDLGVLGK	Cerebrum	—	100.0	MRM	—
Q9D0F9	Pgm1	VDLGVLGK	MockWholeBrain	—	100.0	MRM	—
Q9D0F9	Pgm1	YDYEEVEAEGANK	Cerebellum	—	100.0	MRM	—
Q9D0F9	Pgm1	YDYEEVEAEGANK	Cerebrum	—	100.0	MRM	—
Q9D0I9	Rars1	SDGGYTYDTSDLAAIK	BrainStem	—	100.0	MRM	—
Q9D0I9	Rars1	SDGGYTYDTSDLAAIK	Cerebrum	—	100.0	MRM	—
Q9D0J8	Ptms	SVEAAAELSAK	Cerebellum	—	100.0	MRM	—
Q9D0J8	Ptms	SVEAAAELSAK	Cerebrum	—	100.0	MRM	—
Q9D0R2	Tars1	IYGISFPDPK	BrainStem	—	100.0	MRM	—
Q9D0R2	Tars1	IYGISFPDPK	Cerebrum	—	100.0	MRM	—
Q9D172	Gatd3	NLSTFAVDGK	Cerebrum	—	100.0	MRM	—
Q9D1A2	Cndp2	YPSLSLHGIEGAFSGSGAK	BrainStem	—	100.0	MRM	—
Q9D1A2	Cndp2	YPSLSLHGIEGAFSGSGAK	Cerebrum	—	100.0	MRM	—
Q9D1G2	Pmvk	LVLLFSGK	BrainStem	—	100.0	MRM	—
Q9D1G2	Pmvk	LVLLFSGK	Cerebellum	—	100.0	MRM	—
Q9D1G2	Pmvk	LVLLFSGK	Cerebrum	—	100.0	MRM	—
Q9D1G2	Pmvk	LVLLFSGK	MockWholeBrain	—	100.0	MRM	—
Q9D1P4	Chordc1	FQEHIIQAPKPVEAIK	BrainStem	—	100.0	MRM	—
Q9D1P4	Chordc1	FQEHIIQAPKPVEAIK	Cerebellum	—	100.0	MRM	—
Q9D1P4	Chordc1	FQEHIIQAPKPVEAIK	Cerebrum	—	100.0	MRM	—
Q9D1P4	Chordc1	FQEHIIQAPKPVEAIK	MockWholeBrain	—	100.0	MRM	—
Q9D2R0	Aacs	WLSVLEEK	Cerebellum	—	100.0	MRM	—
Q9D2R0	Aacs	WLSVLEEK	MockWholeBrain	—	100.0	MRM	—
Q9D358	Acp1	IELLGSYDPQK	BrainStem	—	100.0	MRM	—
Q9D358	Acp1	IELLGSYDPQK	Cerebrum	—	100.0	MRM	—
Q9D404	Oxsm	VSPFFVPK	Cerebellum	—	100.0	MRM	—
Q9D404	Oxsm	VSPFFVPK	MockWholeBrain	—	100.0	MRM	—
Q9D517	Agpat3	NPSLLGILYGK	BrainStem	—	100.0	MRM	—
Q9D517	Agpat3	NPSLLGILYGK	Cerebellum	—	100.0	MRM	—
Q9D517	Agpat3	NPSLLGILYGK	Cerebrum	—	100.0	MRM	—
Q9D517	Agpat3	NPSLLGILYGK	MockWholeBrain	—	100.0	MRM	—
Q9D6J6	Ndufv2	DTPENNPDTPFDFTPENYK	Cerebellum	—	100.0	MRM	—
Q9D6J6	Ndufv2	DTPENNPDTPFDFTPENYK	Cerebrum	—	100.0	MRM	—
Q9D6J6	Ndufv2	DTPENNPDTPFDFTPENYK	MockWholeBrain	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	BrainStem	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	Cerebellum	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	Cerebrum	—	100.0	MRM	—
Q9D6Y9	Gbe1	IYESHVGISSHEGK	MockWholeBrain	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Cerebellum	—	100.0	MRM	—
Q9D7G0	Prps1	IFSGSSHQDLSQK	Cerebrum	—	100.0	MRM	—
Q9D828	Tfg	LLSNDEVTIK	BrainStem	—	100.0	MRM	—
Q9D855	Uqcrb	WYYNAAGFNK	Cerebrum	—	100.0	MRM	—
Q9D892	Itpa	IDLPEYQGEPDEISIQK	Cerebellum	—	100.0	MRM	—
Q9D892	Itpa	IDLPEYQGEPDEISIQK	Cerebrum	—	100.0	MRM	—
Q9D892	Itpa	IVFVTGNAK	BrainStem	—	100.0	MRM	—
Q9D892	Itpa	IVFVTGNAK	Cerebellum	—	100.0	MRM	—
Q9D892	Itpa	IVFVTGNAK	Cerebrum	—	100.0	MRM	—
Q9D892	Itpa	IVFVTGNAK	MockWholeBrain	—	100.0	MRM	—

SysQuan Mouse Database

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