SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q9CQR6	Ppp6c	VTNEFVHINNLK	Cerebellum	—	100.0	MRM	—
Q9CQR6	Ppp6c	VTNEFVHINNLK	Cerebrum	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	BrainStem	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Cerebellum	—	100.0	MRM	—
Q9CQZ5	Ndufa6	VVDLLVIK	Cerebrum	—	100.0	MRM	—
Q9CR16	Ppid	FEDENFHYK	BrainStem	—	100.0	MRM	—
Q9CR16	Ppid	FEDENFHYK	Cerebellum	—	100.0	MRM	—
Q9CR16	Ppid	FEDENFHYK	Cerebrum	—	100.0	MRM	—
Q9CR16	Ppid	FEDENFHYK	MockWholeBrain	—	100.0	MRM	—
Q9CR86	Carhsp1	LQAVEVVITHLAPGTK	BrainStem	—	100.0	MRM	—
Q9CR86	Carhsp1	LQAVEVVITHLAPGTK	Cerebrum	—	100.0	MRM	—
Q9CR86	Carhsp1	LQAVEVVITHLAPGTK	MockWholeBrain	—	100.0	MRM	—
Q9CXJ1	Ears2	TALYNYIFAK	Cerebellum	—	100.0	MRM	—
Q9CXJ1	Ears2	TALYNYIFAK	Cerebrum	—	100.0	MRM	—
Q9CXJ1	Ears2	TALYNYIFAK	MockWholeBrain	—	100.0	MRM	—
Q9CXW3	Cacybp	ISNYGWDQSDK	BrainStem	—	100.0	MRM	—
Q9CXW3	Cacybp	ISNYGWDQSDK	Cerebellum	—	100.0	MRM	—
Q9CXW3	Cacybp	ISNYGWDQSDK	Cerebrum	—	100.0	MRM	—
Q9CXW4	Rpl11	VLEQLTGQTPVFSK	Cerebellum	—	100.0	MRM	—
Q9CY27	Tecr	DEDVLQK	Cerebellum	—	100.0	MRM	—
Q9CY50	Ssr1	GEDFPANNIVK	Cerebrum	—	100.0	MRM	—
Q9CY50	Ssr1	GEDFPANNIVK	MockWholeBrain	—	100.0	MRM	—
Q9CY64	Blvra	SPLSWIEEK	Cerebellum	—	100.0	MRM	—
Q9CY64	Blvra	SPLSWIEEK	Cerebrum	—	100.0	MRM	—
Q9CY64	Blvra	SPLSWIEEK	MockWholeBrain	—	100.0	MRM	—
Q9CYH2	Prxl2a	AALEYLEDIDLK	BrainStem	—	100.0	MRM	—
Q9CYH2	Prxl2a	AALEYLEDIDLK	Cerebellum	—	100.0	MRM	—
Q9CYH2	Prxl2a	AALEYLEDIDLK	Cerebrum	—	100.0	MRM	—
Q9CYT6	Cap2	SALFAQLNQGEAITK	BrainStem	—	100.0	MRM	—
Q9CYT6	Cap2	SALFAQLNQGEAITK	Cerebellum	—	100.0	MRM	—
Q9CZ13	Uqcrc1	NNGAGYFLEHLAFK	Cerebrum	—	100.0	MRM	—
Q9CZ13	Uqcrc1	NNGAGYFLEHLAFK	MockWholeBrain	—	100.0	MRM	—
Q9CZD3	Gars1	TFFSFPAVVAPFK	BrainStem	—	100.0	MRM	—
Q9CZD3	Gars1	TFFSFPAVVAPFK	Cerebellum	—	100.0	MRM	—
Q9CZS1	Aldh1b1	VAFTGSTEVGHLIQK	Cerebellum	—	100.0	MRM	—
Q9CZS1	Aldh1b1	VAFTGSTEVGHLIQK	Cerebrum	—	100.0	MRM	—
Q9CZU6	Cs	ALGFPLERPK	Cerebrum	—	100.0	MRM	—
Q9D051	Pdhb	VFLLGEEVAQYDGAYK	Cerebrum	—	100.0	MRM	—
Q9D051	Pdhb	VVSPWNSEDAK	Cerebrum	—	100.0	MRM	—
Q9D0F3	Lman1	YQEEFEHFQQELDK	BrainStem	—	100.0	MRM	—
Q9D0F3	Lman1	YQEEFEHFQQELDK	Cerebellum	—	100.0	MRM	—
Q9D0F3	Lman1	YQEEFEHFQQELDK	Cerebrum	—	100.0	MRM	—
Q9D0F3	Lman1	YQEEFEHFQQELDK	MockWholeBrain	—	100.0	MRM	—
Q9D0F9	Pgm1	AIGGIILTASHNPGGPNGDFGIK	BrainStem	—	100.0	MRM	—
Q9D0F9	Pgm1	AIGGIILTASHNPGGPNGDFGIK	Cerebellum	—	100.0	MRM	—
Q9D0F9	Pgm1	AIGGIILTASHNPGGPNGDFGIK	Cerebrum	—	100.0	MRM	—
Q9D0F9	Pgm1	FNISNGGPAPEAITDK	Cerebellum	—	100.0	MRM	—
Q9D0F9	Pgm1	FNISNGGPAPEAITDK	MockWholeBrain	—	100.0	MRM	—
Q9D0F9	Pgm1	IALYETPTGWK	Cerebellum	—	100.0	MRM	—
Q9D0F9	Pgm1	QSVEDILK	Cerebellum	—	100.0	MRM	—

SysQuan Mouse Database

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