SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/µg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/µg)	Incorp. (%)	Assays Available	PTM
P50518	Atp6v1e1	AEEEFNIEK	Spleen	—	90.1	MRM+PRM	—
P50544	Acadvl	FFEEVNDPAK	LymphNodes	—	90.3	MRM+PRM	—
P51859	Hdgf	DLFPYEESK	Thyroid	—	90.2	MRM+PRM	—
P51885	Lum	ILGPLSYSK	BoneMarrow	—	89.6	MRM+PRM	—
P55096	Abcd3	IANPDQLLTQDVEK	Pancreas	—	89.7	MRM+PRM	—
P62192	Psmc1	APQETYADIGGLDNQIQEIK	BrainStem	—	90.3	MRM+PRM	—
P62242	Rps8	LTPEEEEILNK	BrainStem	—	90.5	MRM+PRM	—
P62827	Ran	NLQYYDISAK	Cerebellum	—	89.7	MRM+PRM	—
P63017	Hspa8	GTLDPVEK	BrainStem	—	89.9	MRM+PRM	—
P63038	Hspd1	NAGVEGSLIVEK	BrainStem	—	89.9	MRM+PRM	—
P63038	Hspd1	VGGTSDVEVNEK	LymphNodes	—	90.4	MRM+PRM	—
P63094	Gnas	VLTSGIFETK	SalivaryGland	—	90.1	MRM+PRM	—
P63101	Ywhaz	YLAEVAAGDDK	BoneMarrow	—	90.5	MRM+PRM	—
P63101	Ywhaz	YLAEVAAGDDK	Thymus	—	89.8	MRM+PRM	—
P68040	Rack1	IWDLEGK	Muscle	—	89.9	MRM+PRM	—
P68510	Ywhah	NSVVEASEAAYK	LymphNodes	—	89.9	MRM+PRM	—
P70290	Mpp1	FETVHQIHK	SmallIntestines	—	89.6	MRM+PRM	—
P70441	Nherf1	LVEVNGENVEK	SmallIntestines	—	90.4	MRM+PRM	—
P70460	Vasp	QVWGLNFGSK	SmallIntestines	—	90.0	MRM+PRM	—
P80315	Cct4	GDVTITNDGATILK	BrainStem	—	90.0	MRM+PRM	—
P80317	Cct6a	VLAQNSGFDLQETLVK	Spermatozoa	—	90.4	MRM+PRM	—
P97429	Anxa4	WGTDEVK	LymphNodes	—	90.5	MRM+PRM	—
P99026	Psmb4	FQIATVTEK	Thyroid	—	90.4	MRM+PRM	—
P99029	Prdx5	LLADPTGAFGK	plasma	—	90.5	MRM+PRM	—
Q1XG79	Tmt1a	ELFSNLQEFAGPSGK	Muscle	—	90.4	MRM+PRM	—
Q3TB63	Hspa8	GTLDPVEK	BrainStem	—	89.9	MRM+PRM	—
Q3TCI7	Ldha	SADTLWGIQK	lung	—	89.9	MRM+PRM	—
Q3U5R8	Impa1	LQVSQQEDITK	BoneMarrow	—	90.2	MRM+PRM	—
Q5SQX6	Cyfip2	TVEVLEPEVTK	LymphNodes	—	89.7	MRM+PRM	—
Q60864	Stip1	DAIHFYNK	Spleen	—	90.5	MRM+PRM	—
Q60930	Vdac2	LTFDTTFSPNTGK	kidney	—	90.4	MRM+PRM	—
Q61272	Acta1	VAPEEHPTLLTEAPLNPK	Cerebrum	—	89.7	MRM+PRM	—
Q62261	Sptbn1	LVSQDNFGFDLPAVEAATK	Pancreas	—	90.3	MRM+PRM	—
Q62465	Vat1	TVENVTVFGTASASK	Pancreas	—	89.9	MRM+PRM	—
Q6GSS7	Hist2h2aa1	VTIAQGGVLPNIQAVLLPK	Cerebellum	—	90.5	MRM+PRM	—
Q6P1B1	Xpnpep1	VGVDPLIIPTDYWK	Spermatozoa	—	89.7	MRM+PRM	—
Q6WVG3	Kctd12	FNFLEQAFDK	Heart	—	89.8	MRM+PRM	—
Q7TMK9	Syncrip	DLFEDELVPLFEK	SmallIntestines	—	89.6	MRM+PRM	—
Q7TQI3	Otub1	EYAEDDNIYQQK	Muscle	—	90.2	MRM+PRM	—
Q8BH95	Echs1	AFAAGADIK	Pancreas	—	89.9	MRM+PRM	—
Q8BH95	Echs1	AFAAGADIK	Spermatozoa	—	90.4	MRM+PRM	—
Q8BKZ9	Pdhx	GIQEIADSVK	BrainStem	—	89.9	MRM+PRM	—
Q8BTM8	Flna	VTAQGPGLEPSGNIANK	kidney	—	90.0	MRM+PRM	—
Q8BVE3	Atp6v1h	LGESVQDLSSFDEYSSELK	Thyroid	—	90.1	MRM+PRM	—
Q8C5H8	Nadk2	LKPVIGVNTDPER	SmallIntestines	—	89.6	MRM+PRM	—
Q8CBY8	Dctn4	ATSISTQLPDDPAK	BoneMarrow	—	90.3	MRM+PRM	—
Q8JZU2	Slc25a1	GTYQGLTATVLK	Cerebrum	—	90.1	MRM+PRM	—
Q8K3K7	Agpat2	NDNGDLLPFK	LymphNodes	—	90.1	MRM+PRM	—
Q91Y97	Aldob	LDQGGAPLAGTNK	Pancreas	—	90.3	MRM+PRM	—
Q91YT0	Ndufv1	EAYEAGLIGK	BrainStem	—	90.1	MRM+PRM	—

SysQuan Mouse Database

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