SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q8K2C9	Hacd3	FSFTLPYPVK	MockWholeBrain	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	BrainStem	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Cerebellum	—	100.0	MRM	—
Q8K3J1	Ndufs8	EPATINYPFEK	Cerebrum	—	100.0	MRM	—
Q8K4K6	Pank1	DITAEEEQEEVENLK	BrainStem	—	100.0	MRM	—
Q8K4K6	Pank1	DITAEEEQEEVENLK	Cerebellum	—	100.0	MRM	—
Q8K4K6	Pank1	DITAEEEQEEVENLK	Cerebrum	—	100.0	MRM	—
Q8K4Z3	Naxe	FVPPALEK	BrainStem	—	100.0	MRM	—
Q8K4Z3	Naxe	FVPPALEK	Cerebellum	—	100.0	MRM	—
Q8N9U3	Acss2	LWSIVDK	Cerebrum	—	100.0	MRM	—
Q8QZS1	Hibch	AGIATHFVDSEK	Cerebellum	—	100.0	MRM	—
Q8QZS1	Hibch	QIYPQLK	BrainStem	—	100.0	MRM	—
Q8QZS1	Hibch	QIYPQLK	Cerebrum	—	100.0	MRM	—
Q8QZT1	Acat1	DGLTDVYNK	Cerebellum	—	100.0	MRM	—
Q8QZT1	Acat1	DGLTDVYNK	MockWholeBrain	—	100.0	MRM	—
Q8QZT1	Acat1	LEDLIVK	Cerebrum	—	100.0	MRM	—
Q8R016	Blmh	TLYNNQPIDFLK	BrainStem	—	100.0	MRM	—
Q8R016	Blmh	TLYNNQPIDFLK	Cerebrum	—	100.0	MRM	—
Q8R050	Gspt1	TFDAQIVIIEHK	Cerebrum	—	100.0	MRM	—
Q8R050	Gspt1	TFDAQIVIIEHK	MockWholeBrain	—	100.0	MRM	—
Q8R059	Gale	DYIHVVDLAK	BrainStem	—	100.0	MRM	—
Q8R059	Gale	DYIHVVDLAK	Cerebrum	—	100.0	MRM	—
Q8R0F8	Fahd1	GLPWTLAK	BrainStem	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	ADPLGLEAEK	BrainStem	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	DGVPVFK	BrainStem	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	DGVPVFK	Cerebellum	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	DGVPVFK	Cerebrum	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	DGVPVFK	MockWholeBrain	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	FAELTLK	BrainStem	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	FLFPEGIK	BrainStem	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	FLFPEGIK	Cerebrum	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	IGFTGSTEVGK	BrainStem	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	LQAGTVFVNTYNK	BrainStem	—	100.0	MRM	—
Q8R0Y6	Aldh1l1	LQAGTVFVNTYNK	Cerebrum	—	100.0	MRM	—
Q8R1S0	Coq6	HNTALLAATDLLK	BrainStem	—	100.0	MRM	—
Q8R1S0	Coq6	HNTALLAATDLLK	Cerebellum	—	100.0	MRM	—
Q8R1S0	Coq6	HNTALLAATDLLK	Cerebrum	—	100.0	MRM	—
Q8R1S0	Coq6	HNTALLAATDLLK	MockWholeBrain	—	100.0	MRM	—
Q8R2W9	Pank3	LSYFEPIDITAEEEQEEVESLK	BrainStem	—	100.0	MRM	—
Q8R3P0	Aspa	AQEINHLFGPK	BrainStem	—	100.0	MRM	—
Q8R3P0	Aspa	AQEINHLFGPK	Cerebellum	—	100.0	MRM	—
Q8R3P0	Aspa	AQEINHLFGPK	Cerebrum	—	100.0	MRM	—
Q8R429	Atp2a1	VGEATETALTTLVEK	BrainStem	—	100.0	MRM	—
Q8R429	Atp2a1	VGEATETALTTLVEK	Cerebellum	—	100.0	MRM	—
Q8R429	Atp2a1	VGEATETALTTLVEK	Cerebrum	—	100.0	MRM	—
Q8R574	Prpsap2	SIIGVIPYFPYSK	BrainStem	—	100.0	MRM	—
Q8R574	Prpsap2	SIIGVIPYFPYSK	Cerebellum	—	100.0	MRM	—
Q8R574	Prpsap2	SIIGVIPYFPYSK	Cerebrum	—	100.0	MRM	—
Q8R574	Prpsap2	SIIGVIPYFPYSK	MockWholeBrain	—	100.0	MRM	—
Q8R5A6	Tbc1d22a	FAFADAPNHYK	BrainStem	—	100.0	MRM	—

SysQuan Mouse Database

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