SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q8CHT0	Aldh4a1	SAFEYGGQK	BrainStem	—	100.0	MRM	—
Q8CHT0	Aldh4a1	VGDPAEDFGTFFSAVIDAK	BrainStem	—	100.0	MRM	—
Q8CHT0	Aldh4a1	VGDPAEDFGTFFSAVIDAK	Cerebellum	—	100.0	MRM	—
Q8CHT0	Aldh4a1	VGDPAEDFGTFFSAVIDAK	Cerebrum	—	100.0	MRM	—
Q8CHT0	Aldh4a1	WTSPQVIK	Cerebrum	—	100.0	MRM	—
Q8CIE6	Copa	DADSQNPDAPEGK	BrainStem	—	100.0	MRM	—
Q8CIE6	Copa	DADSQNPDAPEGK	Cerebellum	—	100.0	MRM	—
Q8CIE6	Copa	DADSQNPDAPEGK	Cerebrum	—	100.0	MRM	—
Q8CIH9	Ppat	FGVLSDNFK	BrainStem	—	100.0	MRM	—
Q8CIH9	Ppat	FGVLSDNFK	Cerebellum	—	100.0	MRM	—
Q8CIH9	Ppat	FGVLSDNFK	Cerebrum	—	100.0	MRM	—
Q8JZK9	Hmgcs1	LEVGTETIIDK	BrainStem	—	100.0	MRM	—
Q8JZK9	Hmgcs1	LEVGTETIIDK	Cerebellum	—	100.0	MRM	—
Q8JZK9	Hmgcs1	VTQDATPGSALDK	BrainStem	—	100.0	MRM	—
Q8JZK9	Hmgcs1	VTQDATPGSALDK	Cerebrum	—	100.0	MRM	—
Q8JZR0	Acsl5	EAILEDLQK	BrainStem	—	100.0	MRM	—
Q8JZR0	Acsl5	EAILEDLQK	Cerebellum	—	100.0	MRM	—
Q8JZR0	Acsl5	EAILEDLQK	Cerebrum	—	100.0	MRM	—
Q8JZV9	Bdh2	VIATDINESK	BrainStem	—	100.0	MRM	—
Q8K003	Tma7	GPLATGGIK	BrainStem	—	100.0	MRM	—
Q8K003	Tma7	GPLATGGIK	Cerebellum	—	100.0	MRM	—
Q8K003	Tma7	GPLATGGIK	Cerebrum	—	100.0	MRM	—
Q8K003	Tma7	GPLATGGIK	MockWholeBrain	—	100.0	MRM	—
Q8K093	Trhde	GSGDYALHITK	Cerebrum	—	100.0	MRM	—
Q8K0C4	Cyp51a1	SPIEFLENAYEK	Cerebellum	—	100.0	MRM	—
Q8K0C4	Cyp51a1	SPIEFLENAYEK	Cerebrum	—	100.0	MRM	—
Q8K0C4	Cyp51a1	SPIEFLENAYEK	MockWholeBrain	—	100.0	MRM	—
Q8K0C4	Cyp51a1	TFTYLLGSDAAALLFNSK	MockWholeBrain	—	100.0	MRM	—
Q8K0C9	Gmds	FYQASTSELYGK	BrainStem	—	100.0	MRM	—
Q8K0C9	Gmds	FYQASTSELYGK	Cerebellum	—	100.0	MRM	—
Q8K0C9	Gmds	FYQASTSELYGK	Cerebrum	—	100.0	MRM	—
Q8K0C9	Gmds	FYQASTSELYGK	MockWholeBrain	—	100.0	MRM	—
Q8K135	Kiaa0319l	ELTLPVDSTTLDGSK	Cerebellum	—	100.0	MRM	—
Q8K135	Kiaa0319l	ELTLPVDSTTLDGSK	Cerebrum	—	100.0	MRM	—
Q8K135	Kiaa0319l	ELTLPVDSTTLDGSK	MockWholeBrain	—	100.0	MRM	—
Q8K157	Galm	ASDVVLGFAELEGYLQK	BrainStem	—	100.0	MRM	—
Q8K157	Galm	ASDVVLGFAELEGYLQK	Cerebellum	—	100.0	MRM	—
Q8K157	Galm	ASDVVLGFAELEGYLQK	Cerebrum	—	100.0	MRM	—
Q8K1B8	Fermt3	IDLAVGDVVK	BrainStem	—	100.0	MRM	—
Q8K1B8	Fermt3	IDLAVGDVVK	Cerebellum	—	100.0	MRM	—
Q8K1B8	Fermt3	IDLAVGDVVK	Cerebrum	—	100.0	MRM	—
Q8K1B8	Fermt3	IDLAVGDVVK	MockWholeBrain	—	100.0	MRM	—
Q8K2B3	Sdha	AFGGQSLK	Cerebrum	—	100.0	MRM	—
Q8K2B3	Sdha	AFGGQSLK	MockWholeBrain	—	100.0	MRM	—
Q8K2B3	Sdha	VTLEYRPVIDK	BrainStem	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Cerebellum	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	Cerebrum	—	100.0	MRM	—
Q8K2B3	Sdha	WHFYDTVK	MockWholeBrain	—	100.0	MRM	—
Q8K2C9	Hacd3	FSFTLPYPVK	BrainStem	—	100.0	MRM	—
Q8K2C9	Hacd3	FSFTLPYPVK	Cerebrum	—	100.0	MRM	—

SysQuan Mouse Database

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