SysQuan Mouse Database

Fast, large-scale absolute quantification for human samples. Unlike traditional methods requiring expensive synthetic peptides for each target, SysQuan uses metabolically K6-labeled mouse tissues with pre-quantified proteins. Simply mix your human samples with our standardized mouse tissue extracts to achieve absolute quantification across the entire proteome.

How to Use:

Search for proteins by gene name, UniProt accession, or peptide sequence
Filter by tissue type or assay availability (MRM, PRM-PASEF)
Select peptides to add them to your cart
Access MRM/PRM transitions, calibration curves, and observed peptide spectra
Download assay data

Available Data:

Optimized MRM & PRM-PASEF transitions for targeted MS
Absolute quantification calibration curves (fmol/μg)
Observed peptide MS/MS spectra from mouse tissues
Multi-tissue coverage across mouse organs

Use the SysQuan Kit: Pre-quantified K6-labeled mouse tissue extracts ready to spike into your human samples for rapid absolute quantification—no need for expensive synthetic peptide standards!

Uniprot ID	Gene	Peptide Sequence	Tissue	Mouse Conc. (fmol/μg)	Incorp. (%)	Assays Available	PTM
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Cerebellum	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	Cerebrum	—	100.0	MRM	—
Q60967	Papss1	GFTGIDSEYEKPEAPELVLK	MockWholeBrain	—	100.0	MRM	—
Q61024	Asns	EAFSDGITSVK	BrainStem	—	100.0	MRM	—
Q61081	Cdc37	EGEEAGPGDPLLEAVPK	Cerebrum	—	100.0	MRM	—
Q61143	Trpc6	VGDALLLAISK	Cerebrum	—	100.0	MRM	—
Q61166	Mapre1	LEHEYIQNFK	BrainStem	—	100.0	MRM	—
Q61166	Mapre1	LEHEYIQNFK	Cerebrum	—	100.0	MRM	—
Q61194	Pik3c2a	FSGLPSNDEPILSFSPK	Cerebellum	—	100.0	MRM	—
Q61272	Acta1	VAPEEHPTLLTEAPLNPK	BrainStem	—	100.0	MRM	—
Q61425	Hadh	TGEGFYK	BrainStem	—	100.0	MRM	—
Q61425	Hadh	TGEGFYK	Cerebellum	—	100.0	MRM	—
Q61425	Hadh	TGEGFYK	Cerebrum	—	100.0	MRM	—
Q61553	Fscn1	SSYDVFQLEFNDGAYNIK	BrainStem	—	100.0	MRM	—
Q61553	Fscn1	SSYDVFQLEFNDGAYNIK	Cerebrum	—	100.0	MRM	—
Q61599	Arhgdib	LNYKPPPQK	BrainStem	—	100.0	MRM	—
Q61599	Arhgdib	LNYKPPPQK	Cerebrum	—	100.0	MRM	—
Q61599	Arhgdib	LNYKPPPQK	MockWholeBrain	—	100.0	MRM	—
Q61656	Ddx5	DWVLNEFK	BrainStem	—	100.0	MRM	—
Q61656	Ddx5	DWVLNEFK	Cerebrum	—	100.0	MRM	—
Q61696	Hspa1a	NQVALNPQNTVFDAK	BrainStem	—	100.0	MRM	—
Q61704	Itih3	ESPGNVQIVNGYFVHFFAPQGLPVVPK	BrainStem	—	100.0	MRM	—
Q61704	Itih3	ESPGNVQIVNGYFVHFFAPQGLPVVPK	Cerebellum	—	100.0	MRM	—
Q61704	Itih3	ESPGNVQIVNGYFVHFFAPQGLPVVPK	MockWholeBrain	—	100.0	MRM	—
Q61704	Itih3	EVSFDVELPK	Cerebellum	—	100.0	MRM	—
Q61704	Itih3	EVSFDVELPK	Cerebrum	—	100.0	MRM	—
Q61704	Itih3	EVSFDVELPK	MockWholeBrain	—	100.0	MRM	—
Q61704	Itih3	FTVSVNVAAGSK	BrainStem	—	100.0	MRM	—
Q61739	Itga6	LETTSNQDNLAPITAK	BrainStem	—	100.0	MRM	—
Q61739	Itga6	LETTSNQDNLAPITAK	Cerebrum	—	100.0	MRM	—
Q61739	Itga6	LETTSNQDNLAPITAK	MockWholeBrain	—	100.0	MRM	—
Q61753	Phgdh	VTADVINAAEK	Cerebellum	—	100.0	MRM	—
Q61768	Kif5b	LITDLQDQNQK	BrainStem	—	100.0	MRM	—
Q61768	Kif5b	LITDLQDQNQK	MockWholeBrain	—	100.0	MRM	—
Q61792	Lasp1	IVYPTEK	Cerebrum	—	100.0	MRM	—
Q61792	Lasp1	TQDQISNIK	BrainStem	—	100.0	MRM	—
Q61792	Lasp1	TQDQISNIK	Cerebellum	—	100.0	MRM	—
Q61792	Lasp1	TQDQISNIK	Cerebrum	—	100.0	MRM	—
Q61838	Pzp	GEAFTLK	BrainStem	—	100.0	MRM	—
Q62108	Dlg4	ANDDLLSEFPDK	BrainStem	—	100.0	MRM	—
Q62108	Dlg4	ANDDLLSEFPDK	Cerebrum	—	100.0	MRM	—
Q62261	Sptbn1	LVSQDNFGFDLPAVEAATK	MockWholeBrain	—	100.0	MRM	—
Q62422	Ostf1	GYADIVQLLLAK	BrainStem	—	100.0	MRM	—
Q62422	Ostf1	GYADIVQLLLAK	Cerebellum	—	100.0	MRM	—
Q62422	Ostf1	GYADIVQLLLAK	Cerebrum	—	100.0	MRM	—
Q62422	Ostf1	GYADIVQLLLAK	MockWholeBrain	—	100.0	MRM	—
Q62422	Ostf1	LGDTALHAAAWK	Cerebrum	—	100.0	MRM	—
Q62425	Ndufa4	FYSVNVDYSK	BrainStem	—	100.0	MRM	—
Q62425	Ndufa4	FYSVNVDYSK	Cerebrum	—	100.0	MRM	—
Q62425	Ndufa4	FYSVNVDYSK	MockWholeBrain	—	100.0	MRM	—

SysQuan Mouse Database

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